Parental gene:

RHOC, ENSCAFG00000013413

Aliases:None
Description:ras homolog family member C [Source:HGNC Symbol;Acc:669]
Organism:Dog (Canis familiaris)
Coordinates:17:62869582..62871890(+)


>ENSCAFG00000013413
CACCCGGCCCCCGCTTCCCTCCTGCCAGCCCCAGCCATGGCTGCGATCAGAAAGAAGCTAGTGATTGTGGGAGATGGAGC
CTGTGGGAAGACCTGCCTCCTCATCGTCTTCAGCAAGGATCAGTTCCCAGAGGTCTATGTCCCTACTGTCTTTGAGAACT
ACATCGCGGACATAGAGGTGGACGGCAAGCAGGTGGAACTGGCTCTATGGGACACGGCTGGGCAGGAAGACTATGATCGC
CTACGGCCTCTCTCCTACCCGGACACTGATGTCATCCTCATGTGCTTCTCCATCGACAGCCCCGACAGCCTGGAAAACAT
TCCTGAGAAATGGACCCCAGAGGTGAAGCACTTCTGCCCCAACGTGCCCATCATCCTAGTGGGGAACAAGAAGGACCTGA
GGCAAGATGAGCACACCAGGAGAGAGCTGGCCAAGATGAAGCAGGAGCCCGTGCGATCTGAAGAGGGCCGGGACATGGCC
AACCGGATCAGTGCCTTTGGCTACCTGGAGTGCTCAGCCAAGACCAAGGAGGGGGTGAGGGAGGTATTCGAGATGGCCAC
TCGGGCGGGTCTCCAGGTTCGCAAGAATAAGCGCCGGAGGGGTTGTCCCATTCTCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 9 .20 RPM
SRP017611_brain 9 .21 RPM
SRP017611_kidney 147 .39 RPM
SRP017611_liver 38 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014299 ortholog_one2one 1 retrogene
retro_btau_1171,
Canis familiaris ENSCAFG00000023066 within_species_paralog 2 retrogenes
retro_cfam_1652, retro_cfam_186,
Callithrix jacchus ENSCJAG00000013657 ortholog_one2one 2 retrogenes
retro_cjac_1657, retro_cjac_2027,
Equus caballus ENSECAG00000010174 ortholog_one2one 3 retrogenes
retro_ecab_112, retro_ecab_257, retro_ecab_932,
Ficedula albicollis ENSFALG00000000736 ortholog_one2one 1 retrogene
retro_falb_11,
Gorilla gorilla ENSGGOG00000002741 ortholog_one2one 2 retrogenes
retro_ggor_18, retro_ggor_732,
Macropus eugenii ENSMEUG00000004807 possible_ortholog 1 retrogene
retro_meug_37,
Monodelphis domestica ENSMODG00000000981 ortholog_one2one 1 retrogene
retro_mdom_1245,
Otolemur garnettii ENSOGAG00000027678 ortholog_one2one 3 retrogenes
retro_ogar_2606, retro_ogar_3360, retro_ogar_58,
Sarcophilus harrisii ENSSHAG00000001981 ortholog_one2one 1 retrogene
retro_shar_455,
Taeniopygia guttata ENSTGUG00000017533 ortholog_one2one 1 retrogene
retro_tgut_11,
Tetraodon nigroviridis ENSTNIG00000015041 ortholog_one2many 1 retrogene
retro_tnig_2,
Xenopus tropicalis ENSXETG00000006898 ortholog_one2one 1 retrogene
retro_xtro_15,
Xiphophorus maculatus ENSXMAG00000008103 ortholog_one2one 1 retrogene
retro_xmac_13,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1152 86.67 65.37
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Download FASTA sequences of all ENSCAFG00000013413 retrocopies