Parental gene:

CTSL1, ENSCAFG00000001149

Aliases:None
Description:Cathepsin L1 Cathepsin L1 heavy chain Cathepsin L1 light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9GL24]
Organism:Dog (Canis familiaris)
Coordinates:1:69937869..69943012(+)


>ENSCAFG00000001149
ATGAATCCTTCACTCTTCTTGACTGCCCTTTGCTTGGGAATAGCCTCAGCAGCTCCCAAATTTGATCAAAGCTTAAATGC
ACAGTGGTACCAGTGGAAGGCAACGCACAGGAGATTATATGGCATGAATGAAGAAGGATGGAGGAGAGCAGTGTGGGAGA
AGAATATGAAAATGATTGAACTGCATAATCGGGAATACAGCCAAGGGAAACATGGCTTCACAATGGCAATGAATGCCTTT
GGTGACATGACCAATGAAGAATTCAGGCAGGTGATGAATGGCTTTCAAAACCAGAAGCACAAGAAAGGGAAAATGTTCCA
AGAACCTCTCTTTGCTGAGATCCCCAAATCAGTGGACTGGAGAGAGAAAGGCTATGTAACTCCTGTGAAGAATCAGGGTC
AGTGTGGTTCTTGTTGGGCTTTTAGTGCAACTGGTGCCCTTGAAGGACAGATGTTCCGGAAAACGGGCAAACTTGTGTCA
CTGAGTGAGCAAAACCTGGTGGACTGCTCTAGGGCTCAAGGTAACGAGGGCTGCAATGGTGGCCTGATGGATAACGCCTT
CCGGTATGTTAAGGACAATGGAGGCCTGGACTCAGAGGAATCTTATCCGTATCTTGGAAGGGACACAGAGACCTGCAATT
ACAAGCCTGAGTGTTCTGCTGCCAATGACACTGGCTTTGTGGACCTCCCTCAACGGGAGAAGGCCCTAATGAAAGCAGTG
GCAACTCTAGGGCCCATCTCTGTTGCTATTGATGCAGGCCATCAGTCTTTCCAATTCTACAAATCAGGCATTTATTTTGA
TCCAGACTGCAGCAGCAAAGATCTAGATCATGGTGTTCTGGTGGTTGGCTATGGCTTTGAAGGAACAGATTCAAATAATA
AATTTTGGATTGTCAAGAACAGTTGGGGTCCAGAATGGGGCTGGAATGGCTATGTAAAAATGGCCAAAGACCAGAACAAC
CACTGTGGAATTGCCACAGCAGCCAGCTATCCCACTGTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 16 .99 RPM
SRP017611_kidney 77 .07 RPM
SRP017611_liver 67 .22 RPM
SRP012049_cerebellum 16 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000007977 ortholog_many2many 1 retrogene
retro_etel_1465,
Macropus eugenii ENSMEUG00000002168 ortholog_many2many 2 retrogenes
retro_meug_1349, retro_meug_1567,
Macropus eugenii ENSMEUG00000014293 ortholog_many2many 1 retrogene
retro_meug_1873,
Macropus eugenii ENSMEUG00000016209 ortholog_many2many 2 retrogenes
retro_meug_159, retro_meug_1727,
Monodelphis domestica ENSMODG00000002844 ortholog_one2many 1 retrogene
retro_mdom_1101,
Petromyzon marinus ENSPMAG00000003453 ortholog_many2many 1 retrogene
retro_pmar_7,
Vicugna pacos ENSVPAG00000004397 ortholog_one2many 1 retrogene
retro_vpac_433,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_43 100.00 100.00
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Download FASTA sequences of all ENSCAFG00000001149 retrocopies