Parental gene:

PNO1, ENSCAFG00000003256

Aliases:None
Description:partner of NOB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:32790]
Organism:Dog (Canis familiaris)
Coordinates:10:67231150..67241418(+)


>ENSCAFG00000003256
ATGGAGGCGGAGACGGAGATGGACGCCCAGAGCGCCGCGGCCGGGGACGGCTTCACCCCGGTCGCCCGCAGGGGTGCTCG
GCGGGCGAAGAAACGGCGGGCTGAGCAGCTGTCGGCGGCGGGCGAGGGCGCGGACGCGGGCCGCATGGACACGGAGGAGG
CCCGGCCCGCGAAGAGGCCCGTATTCCCGCCCCTCGCCGGGGATGGAGTCCTGGGTGGGAAAGAAGAAACCAGGAAGATT
GCCGTCCCGGCCAACAGGTACACGCCCTTAAAAGAGAACTGGATGAAGATATTCACGCCCATCGTAGAGCACCTGGGGCT
TCAGATACGGTTTAACCTGAAATCGAGGAATGTGGAAATTAGGACTTGTAAAGAAACCAAGGATGTTAGTGCTCTAACAA
AAGCAGCAGATTTTGTGAAAGCCTTTATTCTTGGGTTTCAGGTGGAGGACGCGCTTGCCCTCATTAGGTTGGATGATCTC
TTCCTAGAGTCTTTTGAAATTACAGATGTGAAGCCCCTAAAGGGAGACCACCTGTCCAGGGCAATAGGAAGAATTGCTGG
CAAAGGAGGAAAAACCAAGTTCACCATAGAGAATGTGACACGGACACGGATAGTTTTGGCTGATGTGAAAGTTCACATCC
TTGGCTCTTTCCAAAACATCAAGATGGCAAGAACTGCCATTTGCAACCTCATCCTGGGAAATCCTCCATCAAAGGTTTAC
GGCAATATCCGAGCCGTGGCTAGCAGAGCAGCAGATCGATTCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 22 .93 RPM
SRP017611_brain 17 .63 RPM
SRP017611_kidney 34 .54 RPM
SRP017611_liver 15 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006564 ortholog_one2many 3 retrogenes
retro_cjac_2615, retro_cjac_273, retro_cjac_4127,
Felis catus ENSFCAG00000025330 ortholog_one2one 2 retrogenes
retro_fcat_1521, retro_fcat_864,
Loxodonta africana ENSLAFG00000000046 ortholog_one2one 1 retrogene
retro_lafr_419,
Microcebus murinus ENSMICG00000010897 ortholog_one2one 1 retrogene
retro_mmur_516,
Myotis lucifugus ENSMLUG00000010850 ortholog_one2one 1 retrogene
retro_mluc_1719,
Macaca mulatta ENSMMUG00000017461 ortholog_one2many 2 retrogenes
retro_mmul_102, retro_mmul_352,
Nomascus leucogenys ENSNLEG00000009993 ortholog_one2one 1 retrogene
retro_nleu_2389,
Oryctolagus cuniculus ENSOCUG00000006100 ortholog_one2many 1 retrogene
retro_ocun_47,
Otolemur garnettii ENSOGAG00000016637 ortholog_one2one 1 retrogene
retro_ogar_3025,
Pongo abelii ENSPPYG00000012353 ortholog_one2one 1 retrogene
retro_pabe_1232,
Rattus norvegicus ENSRNOG00000005524 ortholog_one2one 1 retrogene
retro_rnor_712,
Sus scrofa ENSSSCG00000008352 ortholog_one2one 2 retrogenes
retro_sscr_114, retro_sscr_352,
Tarsius syrichta ENSTSYG00000004007 ortholog_one2one 1 retrogene
retro_tsyr_1625,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1886 72.82 80.71
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Download FASTA sequences of all ENSCAFG00000003256 retrocopies