Parental gene:

SRSF6, ENSCAFG00000009289

Aliases:None
Description:serine/arginine-rich splicing factor 6 [Source:HGNC Symbol;Acc:10788]
Organism:Dog (Canis familiaris)
Coordinates:24:31217125..31220308(+)


>ENSCAFG00000009289
ATGCCGCGCGTCTACATAGGACGCCTGAGCTACAACGTCCGGGAGAAGGACATCCAGCGCTTTTTCAGTGGCTATGGCCG
CCTCCTCGAAATAGACCTCAAAAATGGGTACGGCTTCGTGGAGTTCGAGGACTCCCGCGACGCCGACGACGCCGTTTACG
AGCTGAACGGCAAAGAGCTCTGCGGCGAGCGCGTGATCGTGGAGCACGCCCGGGGCCCGCGCCGTGACCGCGACGGCTAC
AGCTACGGAAGCCGCAGTGGTGGAGGTGGATACAGCAGTCGGAGAACCTCTGGCAGAGACAAATATGGACCACCTGTTCG
TACAGAATTCAGGCTTATTGTAGAAAATCTTTCTAGTCGTTGCAGTTGGCAAGATTTAAAGGATTTCATGAGACAAGCAG
GTGAAGTAACCTATGCGGATGCTCACAAAGAACGCACAAACGAGGGCGTGATTGAATTCCGTTCCTACTCGGACATGAAG
CGTGCTTTGGACAAACTGGATGGTACAGAAATAAATGGCAGAAATATTAGGCTCATTGAGGATAAACCACGAACGAGCCA
TAGGCGGTCTTACTCTGGAAGCAGATCAAGGTCACGGTCTAGAAGAAGGTCACGAAGTAGGAGTCGTAGGAGCAGCCGCA
GTAGATCTCGAAGTATCTCAAAAAGTCGCTCCCGATCCAGGTCTCGGAGCAAAGGTCGATCACGTTCTCGATCAAAAGGC
AGGAAATCTAGATCAAAAAGCAAATCTAAGCCCAAGTCTGATCGGGGCTCCCGTTCGCGCTCTCGAAGCAGATCTAAGGA
GTATGAGAAATCTCGAAGCAGGTCTCGCTCTCGATCTCGTTCCCCCAAAGAAAATGGAAAAGGTGATATAAAGTCAAAGT
CTAGGTCAAGAAGCCAGTCTCGTTCAAATTCTCCCCTTCCTGCTCCACCCTCAAAAGCACGTTCTGTGTCCCCTCCACCA
AAAAGAGCTTCAAGATCCCGTTCTAGATCTCGTTCAAAGTCCAGGTCACGGTCCAGATCGAGTTCCAGAGATTAA

Library Parental gene expression (RPM)
SRP017611_brain 46 .05 RPM
SRP017611_kidney 94 .10 RPM
SRP017611_liver 52 .93 RPM
SRP012049_cerebellum 70 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002061 ortholog_one2one 1 retrogene
retro_acar_191,
Canis familiaris ENSCAFG00000029620 other_paralog 1 retrogene
retro_cfam_652,
Gorilla gorilla ENSGGOG00000009808 possible_ortholog 1 retrogene
retro_ggor_2176,
Monodelphis domestica ENSMODG00000003107 ortholog_one2one 1 retrogene
retro_mdom_697,
Oryctolagus cuniculus ENSOCUG00000009785 possible_ortholog 1 retrogene
retro_ocun_312,
Rattus norvegicus ENSRNOG00000006380 ortholog_one2many 1 retrogene
retro_rnor_1752,
Tupaia belangeri ENSTBEG00000013448 ortholog_one2one 1 retrogene
retro_tbel_383,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_392 83.48 65.99
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Download FASTA sequences of all ENSCAFG00000009289 retrocopies