Parental gene:

SRSF6, ENSGGOG00000009808

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:20:41189921..41193378(+)


>ENSGGOG00000009808
ATGCCGCGCGTCTACATAGGACGCCTGAGCTACAACGTCCGGGAGAAGGACATCCAGCGCTTTTTCAGTGGCTATGGCCG
CCTCCTCGAAGTAGACCTCAAAAATGGGTACGGCTTCGTGGAGTTCGAGGACTCCCGCGACGCCGACGACGCCGTTTACG
AGCTGAACGGCAAGGAGCTCTGCGGCGAGCGCGTGATCGTAGAGCACGCCCGGGGCCCGCGTCGCGATCGCGACGGCTAC
AGCTACGGAAGCCGCAGTGGTGGAGGTGGATACAGCAGTCGGAGAACATCTGGCAGAGACAAATACGGACCACCTGTTCG
TACAGAATACAGGCTTATTGTAGAAAATCTTTCTAGTCGGTGCAGTTGGCAAGATTTAAAGGATTTTATGCGACAAGCAG
GTGAAGTAACCTATGCGGATGCCCACAAGGAACGAACAAATGAGGGTGTAATTGAGTTTCGCTCCTACTCTGACATGAAG
CGCGCTTTGGACAAACTGGATGGCACAGAAATAAATGGCAGAAATATTAGGCTTATTGAAGATAAGCCACGCACAAGCCA
TAGGCGATCTTACTCTGGAAGCAGATCCAGGTCTCGATCTAGAAGACGGTCACGAAGTAGGAGTCGCAGGAGCAGCCGCA
GTAGATCTCGAAGTATCTCAAAAAGTCGCTCCCGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCGATCAAAAGGC
AGGAAATCTAGATCAAAGAGCAAATCTAAGCCCAAGTCTGATCGGGGCTCCCATTCACATTCTCGAAGCAGATCTAAGGA
TGAATATGAGAAATCTCGAAGCAGGTCTCGGTCCCGATCCCCCAAAGAAAATGGAAAGGGTGATATAAAGTCAAAATCCA
GATCAAGGAGCCAGTCCCGTTCCAATTCGCCGCTACCTGTTCCACCCTCAAAGGCCCGTTCTGTGTCCCCTCCACCAAAA
AGAGCTACTTCAAGATCCCGTTCTAGATCTCGCTCAAAGTCAAGATCAAGGTCCAGGTCGAGTTCCAGAGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 43 .21 RPM
SRP007412_cerebellum 48 .34 RPM
SRP007412_heart 21 .01 RPM
SRP007412_kidney 103 .86 RPM
SRP007412_liver 81 .72 RPM
SRP007412_testis 105 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002061 ortholog_one2many 1 retrogene
retro_acar_191,
Canis familiaris ENSCAFG00000009289 possible_ortholog 1 retrogene
retro_cfam_392,
Echinops telfairi ENSETEG00000006221 ortholog_one2one 1 retrogene
retro_etel_1261,
Homo sapiens ENSG00000124193 ortholog_one2one 1 retrogene
retro_hsap_1809,
Gorilla gorilla ENSGGOG00000017186 other_paralog 5 retrogenes
retro_ggor_1654, retro_ggor_1706, retro_ggor_2030, retro_ggor_2746, retro_ggor_630,
Monodelphis domestica ENSMODG00000003107 ortholog_one2many 1 retrogene
retro_mdom_697,
Nomascus leucogenys ENSNLEG00000006524 ortholog_one2one 1 retrogene
retro_nleu_1294,
Oryctolagus cuniculus ENSOCUG00000009785 possible_ortholog 1 retrogene
retro_ocun_312,
Pongo abelii ENSPPYG00000011019 ortholog_one2one 1 retrogene
retro_pabe_1483,
Pan troglodytes ENSPTRG00000013506 ortholog_one2one 1 retrogene
retro_ptro_3057,
Rattus norvegicus ENSRNOG00000006380 ortholog_many2many 1 retrogene
retro_rnor_1752,
Tupaia belangeri ENSTBEG00000013448 possible_ortholog 1 retrogene
retro_tbel_383,
Tursiops truncatus ENSTTRG00000015410 ortholog_one2one 2 retrogenes
retro_ttru_1786, retro_ttru_1787,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2176 91.91 100.00
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Download FASTA sequences of all ENSGGOG00000009808 retrocopies