Parental gene:

SRSF6, ENSACAG00000002061

Aliases:None
Description:serine/arginine-rich splicing factor 6 [Source:HGNC Symbol;Acc:10788]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343365.1:501434..510157(+)


>ENSACAG00000002061
ATGACGACGGTCGCGGAGATGCCGCGCGTCTATATCGGCCGCTTAAGCTACCATGTGCGGGAAAAGGACCTCCAGCGCTT
CTTCAGCGGCTACGGCCGCTTGCTCGAAGTGGATTTAAAAAACGGGTATGGGTTTGTGGAGTTCGAAGATTCCCGGGATG
CAGAGGATGCCGTTTACGAGCTGAACGGCAAAGATTTGTGTGGGGAGCGGGTGATTGTGGAGCATGCCCGTGGCCCCCGT
CGGGATAGAGATGGCTACAGCTACAGCAGCCGCAGTGGAGGATACAGCAGTCGAAGAACATCAGGAAGAGATAAATATGG
ACCACCTGTTCGTACCGAATACAGATTAATTGTTGAAAACCTTTCCAGTCGCTGTAGTTGGCAGGATTTGAAAGATTTCA
TGAGGCAAGCTGGTGAGGTCACTTATGCGGATGCTCACAAAGAACGCACAAACGAAGGAGTCATTGAGTTCCGGTCTTAC
TCTGACATGAAGCGAGCTCTAGACAAATTGGATGGCACCGAAATAAATGGGCGAAAGATCAGGCTGGTTGAAGACAAACC
ACGGTCAAGCCACAGGCGATCTTATTCTGGGAGTCGATCAAGGTCACGTTCTAGACGACGATCACGTAGCAGGAGTCGTA
GGAGCAGCCGCAGTAGATCTCGTAGTGCCTCCAAAAGCCGATCACGCTCTAAATCTAGGTCTCGAAGCAAAGATCGATCG
CGTTCAAGATCTAAAAGTAGAAAGTCTAGATCAAAGAGCAAGACTAAGGTGAAATCTGACAGAGGTTCACAGTCCCGCAG
CAGATCCAAAGAGAAGTCTGAGAAGTCTCGCAGCAGATCTAGGTCTGCGTCTCAATCACCCAAAGAAAATGGTAAAGGGG
AAGCAAAATCTAAATCGAGGTCAAGGAGCAGATCTCGTTCCAATTCTCCAGTGGAGCACCAACCTGACAAGGCCCATTCA
GAGTCTCCACCCGAAAGAGTTGCATCAAGGTCACGATCACGATCTCATTCAAAATCTCGCTCACGCTCAAGATCCAGCTC
ACAAGATTAA

Library Parental gene expression (RPM)
SRP009831_adrenal 164 .83 RPM
SRP009831_brain 116 .36 RPM
SRP009831_dewlap 91 .80 RPM
SRP009831_embryo 394 .01 RPM
SRP009831_heart 109 .83 RPM
SRP009831_liver 65 .73 RPM
SRP009831_lung 137 .27 RPM
SRP009831_ovary 69 .88 RPM
SRP009831_skeletal_muscle 34 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000009289 ortholog_one2one 1 retrogene
retro_cfam_392,
Echinops telfairi ENSETEG00000006221 ortholog_one2one 1 retrogene
retro_etel_1261,
Homo sapiens ENSG00000124193 ortholog_one2one 1 retrogene
retro_hsap_1809,
Gorilla gorilla ENSGGOG00000009808 ortholog_one2many 1 retrogene
retro_ggor_2176,
Monodelphis domestica ENSMODG00000003107 ortholog_one2one 1 retrogene
retro_mdom_697,
Nomascus leucogenys ENSNLEG00000006524 ortholog_one2one 1 retrogene
retro_nleu_1294,
Oryctolagus cuniculus ENSOCUG00000009785 ortholog_one2many 1 retrogene
retro_ocun_312,
Pongo abelii ENSPPYG00000011019 ortholog_one2one 1 retrogene
retro_pabe_1483,
Pan troglodytes ENSPTRG00000013506 ortholog_one2one 1 retrogene
retro_ptro_3057,
Rattus norvegicus ENSRNOG00000006380 ortholog_one2many 1 retrogene
retro_rnor_1752,
Tupaia belangeri ENSTBEG00000013448 ortholog_one2one 1 retrogene
retro_tbel_383,
Tursiops truncatus ENSTTRG00000015410 ortholog_one2one 2 retrogenes
retro_ttru_1786, retro_ttru_1787,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_191 68.34 57.02
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Download FASTA sequences of all ENSACAG00000002061 retrocopies