Parental gene:

RDH12, ENSCAFG00000016446

Aliases:None
Description:retinol dehydrogenase 12 (all-trans/9-cis/11-cis) [Source:HGNC Symbol;Acc:19977]
Organism:Dog (Canis familiaris)
Coordinates:8:41685210..41695447(+)


>ENSCAFG00000016446
GAAGTTGAAAAGATGCTGGCTATCTTGGGACTGCTTACCTCCTTCCTTTCTTTCCTGTACGTGATAGCTCCATCCATCAG
GAAGTTCTTTGCTGGTGGGGTTTGTAGATCAAACGTGCAGCTTCCTGGGAAGGTAGTGGTGATCACCGGCGCCAACACGG
GCATTGGCAAGGAGACAGCCAGAGAGCTGGCTCGCAGAGTTTTGGCCCCAGGAGCCCGAGTGTACATTGCCTGCCGAGAC
GTACTGAAGGGGGAGTCTGCAGCCAGTGAAATCCGAGCTGATACAAAGAACTCCCAGGTGCTGGTGCGGAAACTGGACCT
ATCTGATACCAAGTCCATCCGAGCCTTTGCTGAGGGCTTTCTGGCAGAGGAAAAGCAGCTCCATATTCTGATCAACAATG
CGGGGGTGATGATGTGTCCATATTCTAAGACAGCTGATGGCTTTGAAACCCACCTGGGAGTCAACCACCTAGGCCACTTT
CTTCTCACTCACTTGCTCCTGGAGCGGCTGAAGGAGTCCACCCCTGCACGGGTGGTAAACCTGTCATCGGTGGCTCACCA
CATTGGCAAAATTCATTTCCATGACCTCCAGGGTGAGAAGCGCTACAGCCGAGGTTTTGCTTATTGCCACAGCAAGCTGG
CCAATATGCTTTTTACTCGTGAGCTGGCCAAGAGGCTCCAAGGCACGGGGGTCACTACCTATGCTGTGCACCCAGGCGTC
GTCAGCTCTGAGCTAGTGCGACACTCCTTCTTGCTGTGCCTGCTCTGGAGGATCTTCTCCCCCTTTGTCAAGTCGGCACG
GGAGGGGGCACAGACCAGCCTGCACTGTGCCCTGGCTGAGGGTCTGGAGCCCCTGAGTGGCAAGTACTTCAGTGACTGCA
AGAGGGCCTGGGTGTCTCCGAGGGCCCGAGATAACAAAACGGCTGAGCGCTTATGGAATGTCAGCTGTGAGCTTCTAGGA
ATCCAGTGGGATTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 0 .08 RPM
SRP017611_brain 0 .08 RPM
SRP017611_kidney 0 .20 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008036 ortholog_one2one 1 retrogene
retro_amel_673,
Felis catus ENSFCAG00000014092 ortholog_one2one 1 retrogene
retro_fcat_1910,
Loxodonta africana ENSLAFG00000022637 ortholog_one2one 1 retrogene
retro_lafr_847,
Macropus eugenii ENSMEUG00000001473 ortholog_one2one 1 retrogene
retro_meug_41,
Meleagris gallopavo ENSMGAG00000011960 ortholog_one2many 1 retrogene
retro_mgal_16,
Microcebus murinus ENSMICG00000010855 ortholog_one2one 1 retrogene
retro_mmur_432,
Ornithorhynchus anatinus ENSOANG00000015759 ortholog_one2one 1 retrogene
retro_oana_89,
Procavia capensis ENSPCAG00000009359 ortholog_one2one 1 retrogene
retro_pcap_1,
Pelodiscus sinensis ENSPSIG00000010721 ortholog_one2many 1 retrogene
retro_psin_24,
Sarcophilus harrisii ENSSHAG00000012445 ortholog_one2one 1 retrogene
retro_shar_41,
Drosophila melanogaster FBgn0033203 ortholog_many2many 1 retrogene
retro_dmel_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2068 64.42 99.07
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Download FASTA sequences of all ENSCAFG00000016446 retrocopies