Parental gene:

RDH12, ENSSHAG00000012445

Aliases:None
Description:retinol dehydrogenase 12 (all-trans/9-cis/11-cis) [Source:HGNC Symbol;Acc:19977]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834549.1:1032441..1044266(+)


>ENSSHAG00000012445
CAGGTTGGAAAAATGATAGGCATCTTCGTGCTGCTCACCTCCTTCCTTTCCTTCCTGTACATGGCATTTCCCTACATCAG
AAAGTATTTTGCTGGTGGAGTTTGCACATCAACTGTGCAGCTTCCTGGAAAGGTAGTTGTGGTCACTGGAGCCAACACGG
GCATTGGGAAGGAGACGGCCAAAGAGCTTGCTCGGAGAGGAGCCAGAGTATATATTGCCTGCCGGGATGTACTGAAGGGA
GAGTCGGCAGCAAGTGAGATCCGGGCTGCAACAAAGAACCAGCAGGTGTTCGTCAGGAAGCTGGACTTGTCTGACACCAA
GTCAATCCGAGCCTTTGCGGAAGGATTCCTTGCAGAGGAAAAGCAGCTCCACATACTGATTAACAATGCAGGGGTGATGA
TGTGTCCCTACTCCAAAACAGTAGATGGCTTTGAGACCCAGTTTGGAGTCAACCACTTGGGTCACTTTCTTCTGACTCAC
CTGCTCTTGGAGAGGCTAAAAGAGTCAGCTCCATCCCGTATAGTGAACTTATCTTCCGTGATTCATCATTTTGGTAGCAT
TTACTTCCGTGACCTGCAAGGGGAAAAATATTACAATCGTGCCTTTGCTTATTGCCACAGCAAGCTGGCCAATGTGCTTT
TTACCCGTGAATTGGCTTATCGGCTAAGAGGAACTGGTGTCACCACATATGCAGTCCACCCAGGTATTGTCCAATCTGAA
TTGATGCGTCACTCATTCCTCATGTGTTTGCTGTGGCGTCTGTTTACCCCTTTTGTGAAGTCAACTCAACAAGGAGCTCA
AACCAGCCTCCACTGTGCTTTGGCTGAGGGTATTGAGTCTCAGAGTGGCAGATATTTCAGTGATTGCAGGACAGCATGGG
TGTCCCCAAAGGGTCGCAACAACAAAACGGCCAAGCGCTTATGGGAGGTCAGCTGTGAACTCCTGGGCATCTACCTGGAC
TAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008036 ortholog_one2one 1 retrogene
retro_amel_673,
Canis familiaris ENSCAFG00000016446 ortholog_one2one 1 retrogene
retro_cfam_2068,
Equus caballus ENSECAG00000015001 ortholog_one2one 1 retrogene
retro_ecab_1059,
Felis catus ENSFCAG00000014092 ortholog_one2one 1 retrogene
retro_fcat_1910,
Loxodonta africana ENSLAFG00000022637 ortholog_one2one 1 retrogene
retro_lafr_847,
Macropus eugenii ENSMEUG00000001473 ortholog_one2one 1 retrogene
retro_meug_41,
Meleagris gallopavo ENSMGAG00000011960 ortholog_one2many 1 retrogene
retro_mgal_16,
Microcebus murinus ENSMICG00000010855 ortholog_one2one 1 retrogene
retro_mmur_432,
Ornithorhynchus anatinus ENSOANG00000015759 ortholog_one2one 1 retrogene
retro_oana_89,
Procavia capensis ENSPCAG00000009359 ortholog_one2one 1 retrogene
retro_pcap_1,
Pelodiscus sinensis ENSPSIG00000010721 ortholog_one2many 1 retrogene
retro_psin_24,
Drosophila melanogaster FBgn0033203 ortholog_many2many 1 retrogene
retro_dmel_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_41 52.68 64.22
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Download FASTA sequences of all ENSSHAG00000012445 retrocopies