Parental gene:

RPS18, ENSCHOG00000003746

Aliases:None
Description:ribosomal protein S18 [Source:HGNC Symbol;Acc:10401]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_6923:480..1163(+)


>ENSCHOG00000003746
GGTGTGGGGCGAAGGTATGCTCATGTGGTGTTGAGGAAGGCAGACATCGACCTCACCAAGAGGGCAGGAGAGCTCACTGA
GGATGAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGCCAGTATAAGATCCCAGACTGGTTCTTGAACAGACAGA
AGGATGTCAAGGATGGAAAATACAGCCAGGTCCTGGCCAACGGTCTGGACAATAAGCTCCGTGAAGATCTGGAGCGACTG
AAGAAGATTCGGGCCCACAGAGGGCTGCGCCACTTCTGGGGCCTTCGTGTCCGAGGCCAGCACACCAAGACTACTGGCCG
CCGCGGTCGCACTGTGGGTGTGTCCAAGAAGAAATAA

Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000006571 possible_ortholog 5 retrogenes
retro_ggor_1496, retro_ggor_2310, retro_ggor_344, retro_ggor_77, retro_ggor_93,
Loxodonta africana ENSLAFG00000032173 possible_ortholog 1 retrogene
retro_lafr_1171,
Macaca mulatta ENSMMUG00000003867 ortholog_one2many 1 retrogene
retro_mmul_2198,
Oryctolagus cuniculus ENSOCUG00000010546 possible_ortholog 1 retrogene
retro_ocun_31,
Pongo abelii ENSPPYG00000025953 possible_ortholog 14 retrogenes
retro_pabe_1138, retro_pabe_128, retro_pabe_1481, retro_pabe_1482, retro_pabe_1813, retro_pabe_1881, retro_pabe_2303, retro_pabe_2407, retro_pabe_2663, retro_pabe_2833, retro_pabe_2967, retro_pabe_3013, retro_pabe_3070, retro_pabe_368,
Pan troglodytes ENSPTRG00000018039 possible_ortholog 1 retrogene
retro_ptro_121,
Rattus norvegicus ENSRNOG00000028505 possible_ortholog 4 retrogenes
retro_rnor_102, retro_rnor_234, retro_rnor_29, retro_rnor_70,
Sarcophilus harrisii ENSSHAG00000006857 possible_ortholog 2 retrogenes
retro_shar_265, retro_shar_563,
Sarcophilus harrisii ENSSHAG00000008658 ortholog_one2one 1 retrogene
retro_shar_618,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_444 81.69 60.17
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2. retro_chof_1248 84.72 61.02
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3. retro_chof_1727 71.19 100.00
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4. retro_chof_1768 70.25 100.00
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5. retro_chof_1968 63.24 56.78
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Download FASTA sequences of all ENSCHOG00000003746 retrocopies