RetrogeneDB ID: | retro_shar_563 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849910.1:363523..363932(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSHAG00000006857 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 63.5 % |
Parental protein coverage: | 89.47 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | IPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNP |
I.EKFQ.ILR.L..N.DG..KI.FA.T.IK.V..RYAHVVL.K.DIDL.KRA.ELTED.V...ITIMQNP | |
Retrocopy | ILEKFQDILRMLSANTDGQ*KIVFAFTVIKSVD*RYAHVVLKKVDIDLIKRADELTEDKVKQAITIMQNP |
Parental | RQYKIPD-WFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTG |
.QY...D..FLN.QK..KDGK.SQVLANGL..KL.EDLE.LKKI..H..L.HF..L.V..Q..K..G | |
Retrocopy | WQYDSLD>CFLNGQKGIKDGKDSQVLANGLYSKLLEDLE*LKKIQVHQELQHFGDL*VQDQDYKPQG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |