Parental gene: | C8orf59, ENSCJAG00000000379 |
| Aliases: | None |
| Description: | chromosome 8 open reading frame 59 [Source:HGNC Symbol;Acc:32235] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 16:37229199..37236260(-) |
>ENSCJAG00000000379
ATGGCCAAAAACAAATTAAGAGGGCCTAAGTCCAGGAATGTATTTCACATAGCAAGCCAAAAAAACTTTAAGGCTAAAAA
CAAAGCAAAACCAGTTACCACTAATCTTAAGAAGATAAACATTATGAATGAAGAAAAAATCAACAGAGTAAATAAAGCTT
TTGTAGATGTACAAAAGGAACTTGCACATTTCTCAAAAGGCCTTTCGCTTGACCCTCTGCAGAAAGAACTGATTCCTCAG
CGGCGTCATGAAAGCAAACCAGTTAATGTTGATGAAGCTACAAAATTAATGGCTCAGTTGTAA
ATGGCCAAAAACAAATTAAGAGGGCCTAAGTCCAGGAATGTATTTCACATAGCAAGCCAAAAAAACTTTAAGGCTAAAAA
CAAAGCAAAACCAGTTACCACTAATCTTAAGAAGATAAACATTATGAATGAAGAAAAAATCAACAGAGTAAATAAAGCTT
TTGTAGATGTACAAAAGGAACTTGCACATTTCTCAAAAGGCCTTTCGCTTGACCCTCTGCAGAAAGAACTGATTCCTCAG
CGGCGTCATGAAAGCAAACCAGTTAATGTTGATGAAGCTACAAAATTAATGGCTCAGTTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .16 RPM |
| SRP051959_skeletal_muscle | 11 .44 RPM |
| SRP051959_lymph_node | 7 .01 RPM |
| SRP051959_lung | 7 .26 RPM |
| SRP051959_liver | 6 .65 RPM |
| SRP051959_kidney | 7 .21 RPM |
| SRP051959_heart | 11 .79 RPM |
| SRP051959_colon | 3 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002409 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000032227 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000021965 | ortholog_one2one | 5 retrogenes | |
| Felis catus | ENSFCAG00000026366 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000176731 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027464 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000032612 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006155 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006381 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000078784 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000029910 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000020385 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000038902 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000006144 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1214 | 72.53 | 91.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1556 | 60.49 | 80.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_1984 | 64.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_2448 | 62.92 | 87.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_2762 | 95.05 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000000379 retrocopies