Parental gene:

ENSCJAG00000006876

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:48261079..48270633(-)


>ENSCJAG00000006876
ATGCTAATTAAAGTGAAGACGCTGACCGGAAAGGAAATTGAGATTGACATTGAACCTACAGATAAGGTGGAGCGAATCAA
GGAGCGTGTGGAGGAGAAGGAGGGAATCCCTCCACAACAGCAGAGACTCATCTACAGTGGCAAACAGATGAATGATGAGA
AAACAGCAGCTGATTACAAGATTTTAGGTGGTTCAGTCCTCCACCTCGTGTTGGCTCTGAGAGGAGGAGGTGGTGGTCTA
AGGCAGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 16 .32 RPM
SRP051959_skeletal_muscle 18 .37 RPM
SRP051959_lymph_node 12 .81 RPM
SRP051959_lung 14 .82 RPM
SRP051959_liver 16 .70 RPM
SRP051959_kidney 17 .13 RPM
SRP051959_heart 16 .89 RPM
SRP051959_colon 10 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000038842 possible_ortholog 1 retrogene
retro_btau_89,
Canis familiaris ENSCAFG00000012097 possible_ortholog 1 retrogene
retro_cfam_1789,
Choloepus hoffmanni ENSCHOG00000001228 ortholog_one2many 5 retrogenes
retro_chof_1012, retro_chof_1616, retro_chof_2696, retro_chof_613, retro_chof_788,
Cavia porcellus ENSCPOG00000010930 possible_ortholog 1 retrogene
retro_cpor_371,
Erinaceus europaeus ENSEEUG00000011640 ortholog_one2many 2 retrogenes
retro_eeur_165, retro_eeur_43,
Echinops telfairi ENSETEG00000018391 ortholog_one2many 2 retrogenes
retro_etel_1118, retro_etel_1677,
Homo sapiens ENSG00000129559 ortholog_one2many 1 retrogene
retro_hsap_180,
Gorilla gorilla ENSGGOG00000016105 possible_ortholog 1 retrogene
retro_ggor_261,
Macaca mulatta ENSMMUG00000029409 ortholog_one2many 1 retrogene
retro_mmul_2236,
Monodelphis domestica ENSMODG00000003254 ortholog_one2many 1 retrogene
retro_mdom_1681,
Vicugna pacos ENSVPAG00000009104 ortholog_one2many 4 retrogenes
retro_vpac_270, retro_vpac_316, retro_vpac_480, retro_vpac_558,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4064 93.67 96.34
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000006876 retrocopies