Parental gene: | MAGOHB, ENSCJAG00000021662 |
| Aliases: | None |
| Description: | mago-nashi homolog B (Drosophila) [Source:HGNC Symbol;Acc:25504] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:10747367..10754829(+) |
>ENSCJAG00000021662
ATGTCTATGGCTAGCGATTTCTATCTGCGCTACTACGTAGGGCACAAGGGCAAGTTTGGGCACGAGTTTCTGGAGTTCGA
ATTTCGGCCGGACGGAAAGCTTAGATATGCCAACAACAGCAATTACAAAAATGACGTAATGATCAGAAAAGAGGCTTATG
TACACAAGAGTGTAATGGAAGAACTGAAGAGAATTATTGATGACAGTGAAATTACAAAAGAAGATGATGCTTTGTGGCCT
CCCCCTGACAGGGTTGGCCGTCAGGAGCTTGAAATTGTCATTGGAGATGAGCACATATCTTTTACCACATCAAAAATAGG
TTCTCTTATTGATGTGAACCAGTCGAAGGATCCTGAAGGCCTTCGAGTATTTTATTATTTGGTACAAGACTTGAAATGTT
TAGTTTTCAGTCTCATTGGATTACACTTCAAGATTAAACCAATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 2 .84 RPM |
| SRP051959_heart | 2 .35 RPM |
| SRP051959_kidney | 3 .82 RPM |
| SRP051959_liver | 3 .81 RPM |
| SRP051959_lung | 3 .20 RPM |
| SRP051959_lymph_node | 2 .85 RPM |
| SRP051959_skeletal_muscle | 2 .23 RPM |
| SRP051959_spleen | 3 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004382 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000004538 | within_species_paralog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000005997 | ortholog_one2one | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000016591 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000111196 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000001782 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005082 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000462 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003355 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000000548 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000004679 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000000835 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014820 | ortholog_one2one | 7 retrogenes | |
| Tarsius syrichta | ENSTSYG00000010452 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_546 | 86.49 | 100.00 | Please wait, loading  |
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| 2. | retro_cjac_1336 | 79.33 | 100.00 | Please wait, loading |
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| 3. | retro_cjac_1840 | 97.30 | 100.00 | Please wait, loading |
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| 4. | retro_cjac_1858 | 69.50 | 95.27 | Please wait, loading |
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| 5. | retro_cjac_2354 | 75.61 | 54.73 | Please wait, loading |
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| 6. | retro_cjac_3234 | 84.46 | 100.00 | Please wait, loading |
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| 7. | retro_cjac_3250 | 72.85 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000021662 retrocopies