Parental gene:

OCIAD1, ENSCPOG00000011863

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_24:22279735..22300779(+)


>ENSCPOG00000011863
ATGAATGGGCGGGCTGATTTTCGAGAGCCGAATGCAGAAGTTCCAAGACCAATTCCCCTCATAGGGGCTGATTACATTCC
GACAGAGGAAGAAAGAAGAATGTTTGCAGAATGCAACGATGAAAGCTTCTGGTTCAGATCTGTGCCTTTGGCTGCCACAA
GTATGTTGATTACTCAAGGACTAATTAGTAAAGGAATTCTTTCAAGTCATCCCAGATTTGGTTCCATCCCTAAACTTATA
TTTGCTTGTATCATGGGATACTTTGCTGGAAAACTTTCTTATGTGAGAACTTGCCAAGAAAAGTTCAAGAATCTCGAAAA
TTCCCCTCTTGGAGAAGCTTTACGATCAGGACAAGCACGACGATCTTCACCATCTGGGCACTATTCTCAAAAGTCAAAAT
ATGACTCCAATGTGAGTGGTCAGTCCTCTTTTGTGACCTCCCCTGCAGCAGACAACATAGAAAAGGAGATGCTTCCTCAT
TATGAGCCAATTCCGTTCAGTGCTTCTGTGAATGAATCTGCTCCCACTGGTATTTCTGATCATATTGCCCAAGGACCTGA
TCCCAACCTTGAAGAAAGCCCCAAAAGAAAAAACATTACCTATGAGGAATTAAGACAAAAGAACAGAGAGTCATATGAAG
TAACTTTAACACAAAAGACTGGCCCCTCAGTCAGGCCTATGCAGGAAACAGTGCCAAAAAAAGAAGTCAAAGTAAACAAA
TATGGAGATACTTGGGATGAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 231 .22 RPM
SRP017611_kidney 62 .71 RPM
SRP017611_liver 62 .64 RPM
SRP040447_lung 29 .76 RPM
SRP040447_skeletal_muscle 23 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000005961 ortholog_one2one 1 retrogene
retro_etel_1731,
Latimeria chalumnae ENSLACG00000014002 ortholog_one2one 1 retrogene
retro_lcha_88,
Macropus eugenii ENSMEUG00000010655 ortholog_one2one 2 retrogenes
retro_meug_1692, retro_meug_2016,
Monodelphis domestica ENSMODG00000020640 ortholog_one2one 1 retrogene
retro_mdom_1103,
Sarcophilus harrisii ENSSHAG00000018132 ortholog_one2many 1 retrogene
retro_shar_74,
Ictidomys tridecemlineatus ENSSTOG00000014963 ortholog_one2one 1 retrogene
retro_itri_986,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_928 81.38 99.60
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Download FASTA sequences of all ENSCPOG00000011863 retrocopies