Parental gene: | OCIAD1, ENSMODG00000020640 |
| Aliases: | None |
| Description: | OCIA domain containing 1 [Source:HGNC Symbol;Acc:16074] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 5:174205251..174273834(-) |
>ENSMODG00000020640
ATGGGAATGACACGTAGGACACAACTTCTAAAAGCAGCTCACACAGGAAAGATGAATGGAAGGACTGATTTTGGGACAGA
GCAGAATGCAGAAGTCTCACCACCACTCCCTAACATAGGAATGGATTACATTCCAACAGAAGAGGAAAGGAGAGCCTTCA
TTGAATGTAATCAAGAGAGCTTCTGGTACAGATCTCTTCCTTTTTCTGCAACAAGTATGTTGGTTACTCAGGGATTAATT
GCTAAAGGAATTCTTTCCAGCCATCCCAAATATGGTTCTGTTCCTAAACTTGTATTTGCTTGTGTAATGGGATACTTAGC
TGGAAAAATTTCTTACGTGAAAACTTGCCAAGAGAAGTTTAAACGGCTTGAAAATTCTCCTCTTGGTGAAGCTCTGCGTC
TGGGACAGGGAGCTCGATTTGGATCACCTGGATATCTTTCACAAAAGTCAGAATTTGAGCCAGCACCTACATCTATTGGA
GCATCCCCCACATCTGAAAAGAGTGAAAAAGAAAGTTCCTTTCCTCTTTATGAACCAGTCCCCTTCAGTGCTTCCTTGAA
TGAATCAACTCCTACTGGTATTACTGATTATAATGCCCAAGGACCTGATACAAGCATAGAAGAAAATCTTTCTAAGAAAA
AAGTTGTTACATATGAAGAATTAAGGAATAAGAACAGAGAAACATATGAAGTTGCCTTGTCACAAAAAAGTGACACCCCA
CTTAAGCCTATACAGGAAAGAACACCAAAAAAACAAGGGAAAGTAAACCAATATGGAGATACTTGGGATGAGTGA
ATGGGAATGACACGTAGGACACAACTTCTAAAAGCAGCTCACACAGGAAAGATGAATGGAAGGACTGATTTTGGGACAGA
GCAGAATGCAGAAGTCTCACCACCACTCCCTAACATAGGAATGGATTACATTCCAACAGAAGAGGAAAGGAGAGCCTTCA
TTGAATGTAATCAAGAGAGCTTCTGGTACAGATCTCTTCCTTTTTCTGCAACAAGTATGTTGGTTACTCAGGGATTAATT
GCTAAAGGAATTCTTTCCAGCCATCCCAAATATGGTTCTGTTCCTAAACTTGTATTTGCTTGTGTAATGGGATACTTAGC
TGGAAAAATTTCTTACGTGAAAACTTGCCAAGAGAAGTTTAAACGGCTTGAAAATTCTCCTCTTGGTGAAGCTCTGCGTC
TGGGACAGGGAGCTCGATTTGGATCACCTGGATATCTTTCACAAAAGTCAGAATTTGAGCCAGCACCTACATCTATTGGA
GCATCCCCCACATCTGAAAAGAGTGAAAAAGAAAGTTCCTTTCCTCTTTATGAACCAGTCCCCTTCAGTGCTTCCTTGAA
TGAATCAACTCCTACTGGTATTACTGATTATAATGCCCAAGGACCTGATACAAGCATAGAAGAAAATCTTTCTAAGAAAA
AAGTTGTTACATATGAAGAATTAAGGAATAAGAACAGAGAAACATATGAAGTTGCCTTGTCACAAAAAAGTGACACCCCA
CTTAAGCCTATACAGGAAAGAACACCAAAAAAACAAGGGAAAGTAAACCAATATGGAGATACTTGGGATGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000011863 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005961 | ortholog_one2one | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000014002 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010655 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000025531 | within_species_paralog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000018132 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014963 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1103 | 80.24 | 94.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000020640 retrocopies