Parental gene:

OCIAD1, ENSMODG00000020640

Aliases:None
Description:OCIA domain containing 1 [Source:HGNC Symbol;Acc:16074]
Organism:Opossum (Monodelphis domestica)
Coordinates:5:174205251..174273834(-)


>ENSMODG00000020640
ATGGGAATGACACGTAGGACACAACTTCTAAAAGCAGCTCACACAGGAAAGATGAATGGAAGGACTGATTTTGGGACAGA
GCAGAATGCAGAAGTCTCACCACCACTCCCTAACATAGGAATGGATTACATTCCAACAGAAGAGGAAAGGAGAGCCTTCA
TTGAATGTAATCAAGAGAGCTTCTGGTACAGATCTCTTCCTTTTTCTGCAACAAGTATGTTGGTTACTCAGGGATTAATT
GCTAAAGGAATTCTTTCCAGCCATCCCAAATATGGTTCTGTTCCTAAACTTGTATTTGCTTGTGTAATGGGATACTTAGC
TGGAAAAATTTCTTACGTGAAAACTTGCCAAGAGAAGTTTAAACGGCTTGAAAATTCTCCTCTTGGTGAAGCTCTGCGTC
TGGGACAGGGAGCTCGATTTGGATCACCTGGATATCTTTCACAAAAGTCAGAATTTGAGCCAGCACCTACATCTATTGGA
GCATCCCCCACATCTGAAAAGAGTGAAAAAGAAAGTTCCTTTCCTCTTTATGAACCAGTCCCCTTCAGTGCTTCCTTGAA
TGAATCAACTCCTACTGGTATTACTGATTATAATGCCCAAGGACCTGATACAAGCATAGAAGAAAATCTTTCTAAGAAAA
AAGTTGTTACATATGAAGAATTAAGGAATAAGAACAGAGAAACATATGAAGTTGCCTTGTCACAAAAAAGTGACACCCCA
CTTAAGCCTATACAGGAAAGAACACCAAAAAAACAAGGGAAAGTAAACCAATATGGAGATACTTGGGATGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000011863 ortholog_one2one 1 retrogene
retro_cpor_928,
Echinops telfairi ENSETEG00000005961 ortholog_one2one 1 retrogene
retro_etel_1731,
Latimeria chalumnae ENSLACG00000014002 ortholog_one2one 1 retrogene
retro_lcha_88,
Macropus eugenii ENSMEUG00000010655 ortholog_one2one 2 retrogenes
retro_meug_1692, retro_meug_2016,
Monodelphis domestica ENSMODG00000025531 within_species_paralog 1 retrogene
retro_mdom_1006,
Sarcophilus harrisii ENSSHAG00000018132 ortholog_one2many 1 retrogene
retro_shar_74,
Ictidomys tridecemlineatus ENSSTOG00000014963 ortholog_one2one 1 retrogene
retro_itri_986,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1103 80.24 94.32
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Download FASTA sequences of all ENSMODG00000020640 retrocopies