Parental gene:

CDCA3, ENSCPOG00000012334

Aliases:None
Description:cell division cycle associated 3 [Source:HGNC Symbol;Acc:14624]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_107:418455..420035(+)


>ENSCPOG00000012334
ATGGGCTCAGCCAAGAGCGTGCCAGCCACTCCATCGCGGCCTCCACCACATAACAAGCTTCTGGCTCGAGTAGCGGACCC
TCGCTCTCCTAGTGCTGGCATCCAGCGCACTCCTATCCAGGTAGAGAGCTCTCCACAAACAAGCCTGCCAGCCAGAGAAG
AGCTAGAGGATCCTAAGCAGGCCCAGGACTCAGAAGATCCTCGCTCTCCTACCCTTGGCATTGCACGGACACCTATGAAG
ACCTGCAGTGTAGACTCTGAGAATCCACTGGTGAAACAACTGAGTGAAGTATTTGAGACTGAAGCCTCAAAATCAGATCT
TTCCTCAGAGTCCATTCTGGCCCTGGGAGCAATTTTGTCTTCTAAACTGGACTTGTCTGTGGATACTGAGTTAATCCTGC
AGGACCAGACAAAACCTTGGAACCAGACCAAGTTCCCCTCTAAACAGATGTTGTCCAAGGAGGAAGCTAGACAGCCCACT
GAAACCCTCATGGCCATCCAGAGCTCAGACAAGTCTTCAAGAGACCTTGAGACTCCCAAATCTTCAGGTTCTAAGCATAA
TAGACGGAAACAAAACAGCAAGGTACTAGGCAGATCTCCCCTCACCATCCTGCAGGATGACAACTCCCCTGGGACCCTGA
CACCACGACAGGGTAAGCGGCCTTCTCCGCTGAGTGACAATGTTAGGGAACTAAAGGAAGGAGCCACTCTTGGAACTGGA
CAACTTCTGAAAACTGGAGGGCGAGCACGGGAGCCAGTCCAGGACCATGACAAAGAAAATCAACACTTTCCTTTGGTAGA
GAGCTAA

Library Parental gene expression (RPM)
SRP017611_brain 0 .06 RPM
SRP017611_kidney 0 .63 RPM
SRP017611_liver 0 .52 RPM
SRP040447_lung 1 .46 RPM
SRP040447_skeletal_muscle 0 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013985 ortholog_one2many 1 retrogene
retro_amel_1158,
Canis familiaris ENSCAFG00000014650 ortholog_one2one 4 retrogenes
retro_cfam_1100, retro_cfam_1940, retro_cfam_345, retro_cfam_633,
Felis catus ENSFCAG00000004274 ortholog_one2many 2 retrogenes
retro_fcat_1182, retro_fcat_1942,
Mustela putorius furo ENSMPUG00000016781 ortholog_one2one 1 retrogene
retro_mputfur_663,
Pteropus vampyrus ENSPVAG00000012300 ortholog_one2one 4 retrogenes
retro_pvam_235, retro_pvam_248, retro_pvam_297, retro_pvam_667,
Rattus norvegicus ENSRNOG00000015529 ortholog_one2one 1 retrogene
retro_rnor_2685,
Ictidomys tridecemlineatus ENSSTOG00000023573 ortholog_one2one 1 retrogene
retro_itri_804,
Tupaia belangeri ENSTBEG00000001905 ortholog_one2one 1 retrogene
retro_tbel_534,
Vicugna pacos ENSVPAG00000009784 ortholog_one2one 1 retrogene
retro_vpac_296,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1073 95.92 91.42
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Download FASTA sequences of all ENSCPOG00000012334 retrocopies