Parental gene:

Cdca3, ENSRNOG00000015529

Aliases:None
Description:Cell division cycle-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q68FW2]
Organism:Rat (Rattus norvegicus)
Coordinates:4:224365695..224369280(+)


>ENSRNOG00000015529
ATGGGTTCTACCCAGAGCGTCTCAGGCACTCCAGCACGGCCTCTGCCACGCAACAAGCATGTGTCTCGGGTGGCAGACCC
TCGTTCACCTAGTGCTGGCATCCAGCGCACTCCTATTCAGGTGGAGAGCTCGCCACAGCCAAACCCACCTGCAGAACAGC
TGAACAGTCTCAAACAGGCGCAAGACCCAGATCCCCGCTCTCCTACTCTTGGCATTGCTCGGACACCCATGAAGATCAGT
GGTCCAGACTCTCAGTGTCCACTGGTGAAAGAGCTGAGCGAAGTGTTTGAGACCGAAGTGTCCGAGACAGAAGTGTCCGA
ATCGATTTCCTCTCCAGTGCTTGGTCTGCCCCAGGAAACCCCTTTATCTTCTGAACTGGACCTGCCTCCGGACCCGGATC
CCCAGGTATCCCTTGAGGACCAGTTGCTGCCTTGGAGCCAGACTGAACTCAATTCCAAACAGGTGTTTGCCAAGGAGGAA
GCAAAACAATCCACAGAAACCATGGTTTCTGGCCAGACCTCAGACAAGCCCTCCAGAGACCCAGAGACTCCCCAGTCCTC
AGGTTCTAAGCGCAGTAGACGGAAGACAAACAACAAGGTTCTAGGGAGGTCCCCACTCACCATCCTGCAGGATGACAACT
CCCCTGGGACCTTGACACTACGACAGGGTAAGCGGCCTTCTGCCCTAAGTGAAAATGTTAAGGACCTAAAGGAAGGAGTC
ATTCTTGGAACTGGAAGGTTTCTGAAAGCTGGAGGTGGAGCATGGGAGCAAAACGAGGACCATGACAAGGAGAATCAGCA
TTTTGCTTTGATGGAGAGCTAG

Library Parental gene expression (RPM)
SRP017611_brain 1 .22 RPM
SRP017611_kidney 1 .74 RPM
SRP017611_liver 0 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013985 ortholog_one2many 1 retrogene
retro_amel_1158,
Canis familiaris ENSCAFG00000014650 ortholog_one2one 4 retrogenes
retro_cfam_1100, retro_cfam_1940, retro_cfam_345, retro_cfam_633,
Cavia porcellus ENSCPOG00000012334 ortholog_one2one 1 retrogene
retro_cpor_1073,
Felis catus ENSFCAG00000004274 ortholog_one2many 2 retrogenes
retro_fcat_1182, retro_fcat_1942,
Mustela putorius furo ENSMPUG00000016781 ortholog_one2one 1 retrogene
retro_mputfur_663,
Pteropus vampyrus ENSPVAG00000012300 ortholog_one2one 4 retrogenes
retro_pvam_235, retro_pvam_248, retro_pvam_297, retro_pvam_667,
Ictidomys tridecemlineatus ENSSTOG00000023573 ortholog_one2one 1 retrogene
retro_itri_804,
Tupaia belangeri ENSTBEG00000001905 ortholog_one2one 1 retrogene
retro_tbel_534,
Vicugna pacos ENSVPAG00000009784 ortholog_one2one 1 retrogene
retro_vpac_296,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2685 88.64 100.00
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Download FASTA sequences of all ENSRNOG00000015529 retrocopies