Parental gene:

CDCA3, ENSPVAG00000012300

Aliases:None
Description:cell division cycle associated 3 [Source:HGNC Symbol;Acc:14624]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_10929:24090..25671(+)


>ENSPVAG00000012300
ATGGGCTCAGCCAAGAGCGTCCCAGTCACTCCATCGCGGCCTCCGCCGCGCAACAAGCATCTGGCTCGAGTGGCGGACCC
GCGTTCACCAAGTGCCGGCATCCTGCGCACTCCCATCCAGGTGGAGAGCTCTCCACAGCCAAATCTACCAGCAAGGGACC
AGCTGGAGGGTTCTAATCAGGCCCAGGGCTCAGATCCCCGCTCTCCTACCTTGGGCATTGCACGGACAATGAAGACCTCC
AGTGGAGAGCCCCCAAGTCCACTGGTGAAAGAGCTGAGTGAAGTATTTGAGACTGAAGGCCCCAAATCGAACCTTCCCCC
AGAGACCGTTCTGCCCCTAGAGGCACCTTCATCTTCTGAATTGGACTTGCCTGTGGGCACCCAGTTTTCCCTTGAGGACA
AGATGGCACCTGGGAGTCAGACTGAGCTCCCCTCTAAGCAGGTGTTTTCCGAGGAGGAAACAGGACAACCCTCAGAAACT
CCTATGGCCAGCCAGAGCTCAGACAAGCCCCTGAGAGACCTCGAGACACCCAGATCTTCAGGTTCTAAACGCAGTAGACG
AAAACCAAATGGCAAGGTACTAGGGAGATCTCCCCTCACCATCCTACAGGATGACAACTCCCCCGGGACTCTGGCTCGGC
AGGTTAAGCGACTTTCTCCCTTGAGTGAAAATGTTAGGGAACTAAAAGAAGGGACCATTCTGGGAACTGGACGCCTTCTG
AGAACCGGAGGACAAACATGGGAGCAAGGCCAGGACCACGACAAGGAAAATCAGCACTTTGCCTTGGTGGAGAACTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013985 ortholog_one2one 1 retrogene
retro_amel_1158,
Canis familiaris ENSCAFG00000014650 ortholog_one2one 4 retrogenes
retro_cfam_1100, retro_cfam_1940, retro_cfam_345, retro_cfam_633,
Cavia porcellus ENSCPOG00000012334 ortholog_one2one 1 retrogene
retro_cpor_1073,
Felis catus ENSFCAG00000004274 ortholog_one2one 2 retrogenes
retro_fcat_1182, retro_fcat_1942,
Mustela putorius furo ENSMPUG00000016781 ortholog_one2one 1 retrogene
retro_mputfur_663,
Rattus norvegicus ENSRNOG00000015529 ortholog_one2one 1 retrogene
retro_rnor_2685,
Ictidomys tridecemlineatus ENSSTOG00000023573 ortholog_one2one 1 retrogene
retro_itri_804,
Tupaia belangeri ENSTBEG00000001905 ortholog_one2one 1 retrogene
retro_tbel_534,
Vicugna pacos ENSVPAG00000009784 ortholog_one2one 1 retrogene
retro_vpac_296,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_235 72.69 88.30
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2. retro_pvam_248 73.14 64.53
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3. retro_pvam_297 69.75 59.25
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4. retro_pvam_667 63.64 68.68
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Download FASTA sequences of all ENSPVAG00000012300 retrocopies