Parental gene:

ENSFCAG00000004274

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:B4:41070359..41072163(-)


>ENSFCAG00000004274
ATGGGCTCAGCCAAGAGCTCCCCGGTCACTCCGGCGCGGCCTCCGCCGCACAACAAGCTTCTGGCTCGAGTGGCGGACCC
CCGTTCACCTAGTGCCGGCATCTTGCGCACTCCCATCCAGGTGGAGAGCTCTCCACAGCCAACCCTACCAGCAGGGGAGC
AGTTGGAGTGTCCTAATGAGGCCCAAGACTCAGATCCCCGCTCTCCTACCCTTGGCATTGCACGGACTCCTATGAAGACC
AGCAGCGGAGAGCCCCCAAGCCCACTGGCGAAACAGCTGAATGAAGTCTTTGAGAAAGAAGCCTCCAAATTGAATCGTCC
TCCGGAGCTTGTTCTGCCCCTAGAGGCAACTTCACCTTCCGAATTGAACTTGCCTCTGGGCACCCAGTTTTCCCTTGAGG
ACCGGATGCCACTCTGGAGCCAGACTGAGCTCCCCTCCAAGCAGGTGTCCTCCAAGGAGGAAGCAGGACAGCCCTCACAA
CCCCCCACGGCCAGCCAGGGCTCAGACAAGCCCTTAAGAGACCCTGAGACTCCCCGATCTTCAGGTTCTAAGCACAATAG
ACGGAAAGGAAATGGCAAGGTACTAGGGAGATCTCCCCTCACCATCCTACAGGATGACAACTCCCCCGGAACTCTGACAC
CACGACAGGGTAAGCGGCCTCCTCCCCTGAGTGAAAATGCTAGGGCACTAAAGGAAGGGGCCATTCTGGGAACTGGACGA
CTTCTGGAAACCGGAGGCCGAGTGTGGGAGCAGGGCCAGGACCAGGACAAGGAAAATCAGCACTTTCCAAACTTGGTGGA
GAACTAG

Library Parental gene expression (RPM)
SRP017611_brain 0 .23 RPM
SRP017611_kidney 0 .82 RPM
SRP017611_liver 1 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013985 ortholog_one2one 1 retrogene
retro_amel_1158,
Canis familiaris ENSCAFG00000014650 ortholog_one2one 4 retrogenes
retro_cfam_1100, retro_cfam_1940, retro_cfam_345, retro_cfam_633,
Cavia porcellus ENSCPOG00000012334 ortholog_one2many 1 retrogene
retro_cpor_1073,
Mustela putorius furo ENSMPUG00000016781 ortholog_one2one 1 retrogene
retro_mputfur_663,
Pteropus vampyrus ENSPVAG00000012300 ortholog_one2one 4 retrogenes
retro_pvam_235, retro_pvam_248, retro_pvam_297, retro_pvam_667,
Rattus norvegicus ENSRNOG00000015529 ortholog_one2many 1 retrogene
retro_rnor_2685,
Ictidomys tridecemlineatus ENSSTOG00000023573 ortholog_one2many 1 retrogene
retro_itri_804,
Tupaia belangeri ENSTBEG00000001905 ortholog_one2many 1 retrogene
retro_tbel_534,
Vicugna pacos ENSVPAG00000009784 ortholog_one2one 1 retrogene
retro_vpac_296,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1182 88.89 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_fcat_1942 65.71 64.93
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000004274 retrocopies