Parental gene: | ARPC1A, ENSDNOG00000005984 |
| Aliases: | None |
| Description: | actin related protein 2/3 complex, subunit 1A, 41kDa [Source:HGNC Symbol;Acc:703] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_154:3865..65376(+) |
>ENSDNOG00000005984
ATGTCTCTGCATCAGTTTTTACTAGAGCCAATCACCTGTCATGCTTGGAACAGGGATCGTACACAGATTGCCCTTAGCCC
CAATAACCATGAAGTTCACATCTATAAGAAGAACGGGAGCCAGTGGGTAAAAACGCACGAACTCAAGGAGCACAATGGAC
ACATCACAGGTATTGACTGGGCTCCCAAGAGTGACCGCATTGTCACTTGCGGGGCAGATCGCAATGCTTATGTCTGGAGT
CAGAAAGATGGTATCTGGAAGCCGACCCTGGTGATCCTGAGAATTAATCGTGCAGCCACTTTTGTGAAGTGGTCCCCTCT
AGAGAACAAATTTGCTGTGGGAAGTGGAGCACGGCTCATTTCTGTTTGTTACTTCGAGTCTGAAAATGACTGGTGGGTAA
GCAAGCACATTAAAAAGCCTATTCGTTCCACGGTCCTCAGCTTGGATTGGCATCCCAACAATGTTTTGCTGGCAGCAGGA
TCCTGTGACTTCAAATGCAGAGTGTTTTCTGCCTACATTAAAGAAGTGGATGAAAAGCCAGCCAGTACACCATGGGGCAG
CAAAATGCCTTTTGGCCAGCTGATGTCAGAATTTGGTGGCAGTGGCACCGGTGGTTGGGTCCACGGGGTCAGCTTTTCTG
CCAGTGGGAGCCGCCTGGCCTGGGTCAGCCATGACAGCACTGTGTCTGTAGCTGATGCCTCAAAAAGTGTGCAGGTTTCA
ACTCTGAAAACGGAGTTCCTGCCACTCCTGAGTGTATCATTTATCTCCGAGAATAGTGTTGTAGCTGCTGGCCACGACTG
CTGCCCAATGCTCTTTAATTACGATGACCGTGGCTGCTTGACCTTCGTCTCCAAACTAGACCTTCCAAAACAGAGCATCC
AGCGCAACATGTCGGCTATGGAACGCTTCCGCAACATGGACAAGAGGGCCACAACCGAGGACCGCAATACAGCCTTGGAG
ACACTGCACCAGAACAGCATCACTCAAGTGTCGATTTATGAGGTGGACAAGCAAGACTGTCGCAAATTTTGCACTACTGG
CATCGATGGAGCCATGACAATTTGGGATTTCAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 82 .84 RPM |
| SRP012922_cerebellum | 49 .63 RPM |
| SRP012922_heart | 9 .98 RPM |
| SRP012922_kidney | 42 .99 RPM |
| SRP012922_liver | 18 .58 RPM |
| SRP012922_lung | 56 .81 RPM |
| SRP012922_quadricep_muscle | 9 .35 RPM |
| SRP012922_spleen | 61 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000005609 | ortholog_one2one | 8 retrogenes | |
| Monodelphis domestica | ENSMODG00000001303 | ortholog_one2one | 9 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003944 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010673 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007609 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003002 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_941 | 75.19 | 75.14 | Please wait, loading  |
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| 2. | retro_dnov_1615 | 58.79 | 54.47 | Please wait, loading |
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| 3. | retro_dnov_1839 | 91.19 | 82.40 | Please wait, loading |
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| 4. | retro_dnov_1966 | 99.00 | 83.52 | Please wait, loading |
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| 5. | retro_dnov_2257 | 68.04 | 60.89 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000005984 retrocopies