RetrogeneDB ID: | retro_meug_1668 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold51932:4045..4595(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARPC1A | ||
Ensembl ID: | ENSMEUG00000005609 | ||
Aliases: | None | ||
Description: | actin related protein 2/3 complex, subunit 1A, 41kDa [Source:HGNC Symbol;Acc:703] |
Percent Identity: | 70.65 % |
Parental protein coverage: | 52.3 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | STPWGTKMPFGQLMS-EFGGTGSGGWVHGVSFSASGNRLAWVSHDSTVSVADASKNMXXXXXXXXXXXXX |
S.PWGTKMPFGQLMS.EFGGT.SGGWVHGV.FS.S.N..AW.SHDS...VADASKNM............. | |
Retrocopy | SQPWGTKMPFGQLMS>EFGGTRSGGWVHGVRFSSSENHFAWISHDSSLTVADASKNMMVSQLKTEFLPLL |
Parental | XVSFVSENSVVAAGHDCCPMLFNYDDRGSLTFVSKLDIPKQSIQRNISAMERFRNMDKR-ATTEDRNTAL |
.VSFVSEN.VVAA.HDCCPMLFNYD..GSLTF.SKLDIPKQ..Q.NIS.ME.FRN..KR.A..ED.NTAL | |
Retrocopy | SVSFVSENNVVAAVHDCCPMLFNYDEHGSLTFISKLDIPKQYPQSNISGMEVFRNKVKRGAMFEDLNTAL |
Parental | DTLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESS |
.TLHQNSITQV.IYEVDKQD..KFCTTGIDGAMT.W.....E.. | |
Retrocopy | NTLHQNSITQVCIYEVDKQD*HKFCTTGIDGAMTVWNLERHEKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |