Parental gene: | ENSDNOG00000011544 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_28829:8051..8908(-) |
>ENSDNOG00000011544
ATGGGGACGCTCCCAGAACGGAAAGATATCCCGCCGTGGGTGAAAGTTCCCGAAGACCTGAGAGATCCCGAGGTGTTCCA
GGTCCAGACGCGGCTGCTGGAAGCCATGTTTGGCCCCCAGGGATCTCGAATCCCGTACATCGAGCAAGTCAGCAAGGCCA
TGCTCGAGCTGAAGGTTCTGGAATCCTCGGATCTCACCGAGGTGGTGGTTTACGGCAACTACTTGTACAAGCTCCGGACC
AAGTGGATGCTCCAGTCCCTGGCCGAGTGGCACCGCCAGCGGCAGGAGCGAGAGATGCTCAGACTTGAGGAAGCCATGAA
TGCCCTCGAACTAGGCCCGTGGACGCAGTGA
ATGGGGACGCTCCCAGAACGGAAAGATATCCCGCCGTGGGTGAAAGTTCCCGAAGACCTGAGAGATCCCGAGGTGTTCCA
GGTCCAGACGCGGCTGCTGGAAGCCATGTTTGGCCCCCAGGGATCTCGAATCCCGTACATCGAGCAAGTCAGCAAGGCCA
TGCTCGAGCTGAAGGTTCTGGAATCCTCGGATCTCACCGAGGTGGTGGTTTACGGCAACTACTTGTACAAGCTCCGGACC
AAGTGGATGCTCCAGTCCCTGGCCGAGTGGCACCGCCAGCGGCAGGAGCGAGAGATGCTCAGACTTGAGGAAGCCATGAA
TGCCCTCGAACTAGGCCCGTGGACGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 0 .00 RPM |
| SRP012922_cerebellum | 0 .00 RPM |
| SRP012922_heart | 0 .00 RPM |
| SRP012922_kidney | 0 .00 RPM |
| SRP012922_liver | 0 .00 RPM |
| SRP012922_lung | 0 .00 RPM |
| SRP012922_quadricep_muscle | 0 .00 RPM |
| SRP012922_spleen | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000002647 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000012338 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009945 | ortholog_many2many | 3 retrogenes | |
| Dipodomys ordii | ENSDORG00000000378 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000203909 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012001 | ortholog_many2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000018513 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004463 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000417 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000060461 | ortholog_many2many | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000016771 | ortholog_many2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000029547 | ortholog_many2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000199 | ortholog_many2many | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000004283 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000005326 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_15 | 86.21 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_53 | 81.90 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_115 | 82.05 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2318 | 78.16 | 73.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011544 retrocopies