Parental gene:

ENSDNOG00000018584

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2852:71..16717(+)


>ENSDNOG00000018584
GATGTTACCAAATTGACGCCACTTTCGCACGAAGTTATCAGCAGACAAGCCACAATTAATATAGGTACAATTGGTCATGT
AGCTCATGGAAAATCTACAGTTGTAAAAGCTATTTCAGGAGTTCATACTGTCAGGTTCAAAAATGAATTAGAAAGAAATA
TTACTATCAAGCTTGGATATGCTAATGCTAAGATTTATAAACTTGATGACCCAAGTTGTCCTCGGCCAGAATGTTACAGA
TCCTGTGGAAGTAGTACACCTGATGAGTTTCCTACAGACATTCCGGGGACCAAAGGGAACTTCAAATTAGTCAGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCTGGTAATGAATCTTGTCCTCAACCTCAGACTTCTGAACACCTGGCTGCTATAGAAATCATGAAGCTGAAG
CATATTTTGATTCTACAAAATAAAATTGATTTGGTAAAAGAAAGTCAGGCTAAAGAACAATATGAGCAGATCCTTGCATT
TGTACAAGGTACAGTAGCAGAAGGAGCTCCTATTATTCCAATTTCTGCTCAGCTGAAATACAATATTGAAGTTGTCTGTG
AGTACATAGTAAAGAAAATTCCAGTGCCCCCAAGAGACTTTACTTCAGAACCCCGACTTATTGTTATTAGGTCCTTTGAT
GTCAACAAACCTGGCTGTGAAGTTGATGACCTTAAGGGCGGTGTAGCTGGTGGCAGTATTCTAAAAGGAGTATTAAAGGT
GGGCCAGGAGATAGAAGTCAGACCTGGTATTGTTTCCAAAGATAGTGAAGGAAAACTCATGTGTAAACCAATCTTTTCCA
AAATTGTATCACTTTTTGCAGAACATAATGATCTTCAGTATGCTGCTCAAGGGGGTCTTATTGGAGTTGGAACAAAAATT
GATCCTACTTTGTGCCGGGCTGATAGAATGGTGGGACAGGTGCTTGGGGCAGTTGGAGCACTACCTGAGATCTTCACAGA
ATTGGAAATTTCCTATTTTCTACTTAGACGGCTTCTAGGTGTCCGCACTGAAGGAGATAAGAAAGCAGCAAAGGTGCAAA
AACTGTCTAAGAATGAAGTGCTCATGGTGAACATAGGATCTCTGTCAACCGGAGGAAGAGTTAGTGCAGTCAAGGCTGAT
TTGGGCAAAATTGTTTTGACTAATCCTGTGTGCACAGAAGTGGGAGAAAAAATAGCCCTTAGCCGAAGAGTTGAGAAACA
CTGG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 93 .93 RPM
SRP012922_cerebellum 33 .40 RPM
SRP012922_heart 29 .93 RPM
SRP012922_kidney 66 .81 RPM
SRP012922_liver 31 .58 RPM
SRP012922_lung 71 .78 RPM
SRP012922_quadricep_muscle 38 .08 RPM
SRP012922_spleen 84 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014337 ortholog_one2many 1 retrogene
retro_btau_1497,
Equus caballus ENSECAG00000017343 ortholog_one2many 1 retrogene
retro_ecab_810,
Echinops telfairi ENSETEG00000000341 ortholog_one2one 4 retrogenes
retro_etel_1061, retro_etel_126, retro_etel_1590, retro_etel_2017,
Loxodonta africana ENSLAFG00000011052 ortholog_one2one 1 retrogene
retro_lafr_971,
Macaca mulatta ENSMMUG00000006979 ortholog_one2many 4 retrogenes
retro_mmul_1965, retro_mmul_2258, retro_mmul_473, retro_mmul_713,
Monodelphis domestica ENSMODG00000007541 ortholog_one2one 2 retrogenes
retro_mdom_1650, retro_mdom_732,
Pongo abelii ENSPPYG00000020194 ortholog_one2many 1 retrogene
retro_pabe_10,
Pteropus vampyrus ENSPVAG00000002533 ortholog_one2one 1 retrogene
retro_pvam_936,
Sus scrofa ENSSSCG00000012178 possible_ortholog 1 retrogene
retro_sscr_805,
Tursiops truncatus ENSTTRG00000012474 ortholog_one2one 4 retrogenes
retro_ttru_1080, retro_ttru_1638, retro_ttru_617, retro_ttru_686,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1454 92.58 53.04
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000018584 retrocopies