Parental gene:

EIF2S3, ENSBTAG00000014337

Aliases:None
Description:Eukaryotic translation initiation factor 2 subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q2KHU8]
Organism:Cow (Bos taurus)
Coordinates:X:126240222..126255115(-)


>ENSBTAG00000014337
ATGGCGGGGGGCGAGGCTGGTGTGACTTTAGGGCAGCCGCACCTTTCTCGGCAAGATCTCGCCACTTTGGATGTTTCCAA
GTTGACGCCACTTTCACATGAAGTTATCAGCAGACAAGCCACAATTAATATAGGTACAATTGGTCACGTAGCTCATGGGA
AATCTACAGTTGTAAAAGCTATTTCTGGAGTCCACACTGTCCGTTTCAAAAATGAACTGGAAAGAAATATTACAATCAAA
CTTGGCTATGCTAATGCTAAGATTTATAAACTTGATGACCCAAGTTGTCCTCGGCCAGAATGTTATAGATCCTGTGGAAG
TAGCACACCTGATGAGTTTCCTACAGACATTCCAGGGACCAAAGGGAACTTCAAATTAGTCAGGCATGTTTCCTTTGTTG
ACTGTCCTGGCCATGATATTCTGATGGCTACTATGCTGAACGGTGCCGCAGTGATGGATGCCGCTCTTCTGTTGATAGCT
GGTAATGAGTCTTGTCCTCAGCCTCAGACATCTGAACACTTGGCTGCTATAGAAATCATGAAACTGAAGCATATTTTGAT
TCTACAAAATAAAATTGATTTGGTAAAAGAAAGCCAGGCTAAAGAACAGTATGAACAGATCCTTGCATTTGTTCAAGGTA
CAGTAGCAGAAGGCGCTCCTATTATCCCAATTTCTGCTCAGCTAAAATACAATATTGAAGTTGTCTGTGAGTACATAGTA
AAGAAAATTCCAGTACCCCCAAGAGACTTTACTTCAGAACCCAGACTTATTGTTATTAGATCCTTTGATGTCAACAAACC
TGGCTGTGAAGTTGATGACCTTAAGGGGGGTGTAGCTGGTGGTAGTATTCTAAAAGGAGTATTAAAGGTGGGCCAGGAGA
TAGAAGTCAGACCTGGTATTGTTTCCAAAGACAGTGAAGGAAAACTCATGTGTAAACCTATCTTTTCCAAAATTGTATCG
CTTTTCGCAGAGCATAATGATCTTCAGTATGCTGCCCCAGGAGGTCTTATTGGAGTTGGAACAAAAATTGACCCCACTTT
GTGCCGGGCTGACAGAATGGTGGGGCAAGTACTTGGTGCGGTTGGAGCTTTACCTGAGATCTTCACAGAATTGGAAATTT
CCTATTTCCTGCTTAGAAGGCTTCTAGGTGTTCGCACTGAAGGAGACAAGAAAGCAGCGAAAGTACAAAAGCTGTCTAAG
AATGAAGTGCTTATGGTGAATATAGGATCCCTGTCGACAGGAGGAAGAGTTAGTGCAGTCAAGGCTGATTTGGGTAAAAT
CGTCTTGACTAATCCTGTGTGCACAGAAGTAGGAGAAAAGATTGCACTTAGCCGAAGAGTTGAGAAACACTGGCGTTTAA
TTGGTTGGGGTCAAATAAGAAGAGGAGTGACAATCAAGCCGACAGTAGATGATGACTGA

Library Parental gene expression (RPM)
ERP005899_liver 45 .13 RPM
ERP005899_muscle 146 .60 RPM
SRP017611_brain 19 .05 RPM
SRP017611_kidney 42 .73 RPM
SRP017611_liver 24 .16 RPM
SRP030211_testis 14 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000018584 ortholog_one2many 1 retrogene
retro_dnov_1454,
Equus caballus ENSECAG00000017343 ortholog_many2many 1 retrogene
retro_ecab_810,
Echinops telfairi ENSETEG00000000341 ortholog_one2many 4 retrogenes
retro_etel_1061, retro_etel_126, retro_etel_1590, retro_etel_2017,
Loxodonta africana ENSLAFG00000011052 ortholog_one2many 1 retrogene
retro_lafr_971,
Macaca mulatta ENSMMUG00000006979 ortholog_many2many 4 retrogenes
retro_mmul_1965, retro_mmul_2258, retro_mmul_473, retro_mmul_713,
Monodelphis domestica ENSMODG00000007541 ortholog_one2many 2 retrogenes
retro_mdom_1650, retro_mdom_732,
Mus musculus ENSMUSG00000035150 possible_ortholog 2 retrogenes
retro_mmus_1408, retro_mmus_3433,
Pongo abelii ENSPPYG00000020194 ortholog_many2many 1 retrogene
retro_pabe_10,
Pteropus vampyrus ENSPVAG00000002533 ortholog_one2many 1 retrogene
retro_pvam_936,
Sus scrofa ENSSSCG00000012178 possible_ortholog 1 retrogene
retro_sscr_805,
Ictidomys tridecemlineatus ENSSTOG00000007144 possible_ortholog 1 retrogene
retro_itri_582,
Tursiops truncatus ENSTTRG00000012474 ortholog_one2many 4 retrogenes
retro_ttru_1080, retro_ttru_1638, retro_ttru_617, retro_ttru_686,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1497 95.73 98.94
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Download FASTA sequences of all ENSBTAG00000014337 retrocopies