Parental gene: | ENSMODG00000007541 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 4:42648218..42663517(-) |
>ENSMODG00000007541
ATGGCGGGCGACGAGCCGGGAGTGACTCTGGGGCAGCCGCATCTGTCTCGCCAGGATTTGACCACTTTGGATGTTACCAA
GTTGACTCCGCTTTCACATGAAGTTATCAGCAGACAAGCCACGATCAATATAGGTACAATTGGTCATGTAGCACATGGAA
AGTCAACAGTAGTAAAAGCTATTTCTGGAGTTCACACTGTTCGATTCAAAAATGAGCTGGAAAGAAATATTACCATTAAA
TTGGGATATGCTAATGCTAAGATTTACCAACTTGATGACCCAAGTTGTTCTCGGCCAGAATGTTACAGATCTTGTGGAAG
TAGCACACCTGATGAATTTCCTACAGACATTCCAGGAACTAAAGGAAACTTTAAATTAGTCAGACATGTCTCCTTTGTGG
ATTGTCCTGGTCACGATATTTTGATGGCTACTATGCTGAACGGTGCAGCAGTCATGGATGCAGCTCTGTTATTAATAGCT
GGCAATGAGTCTTGTCCTCAGCCTCAGACTTCTGAGCACCTAGCTGCCATTGAAATCATGAAATTGAAACACATTCTGAT
TCTACAGAATAAGATTGATTTGGTGAAAGAAAGTCAGGCTAAGGAACAATATGAACAAATCCTTGCATTTGTACAAGGTA
CAGTTGCAGAGGGAGCTCCTATTATTCCAATTTCTGCTCAACTGAAGTATAATATTGAAGTTGTTTGTGAATATATAGTA
AAGAAAATTCCAGTACCTCCAAGAGACTTTACTTCAGAACCCAGACTTATTGTTATTCGGTCTTTTGACGTCAACAAGCC
TGGTTGTGAAGTTGATGACCTTAAGGGTGGTGTGGCTGGTGGTAGTATTCTCAAAGGAGTATTAAAGGTGGGACAGGAGT
TGGAGGTCAGGCCTGGCATTGTCTCTAAAGATAGTGAAGGGAAACTCATGTGTAAGCCAATCTTTTCCAAAATTGTATCA
CTTTTTGCAGAGCATAATGACCTGCAGTATGCTGCTCCTGGAGGCCTTATTGGGGTTGGAACAAAAATTGATCCAACTTT
GTGCCGAGCTGACAGAATGGTGGGACAGGTTCTTGGTGCAGTTGGAGCATTGCCTGAAATCTTTACAGAATTGGAAATTT
CCTATTTCCTGCTTAGAAGACTTTTAGGAGTGCGCACTGAAGGAGACAAAAAAGCAGCGAAAGTACAAAAATTGTCCAAG
AATGAAGTGCTCATGGTGAACATAGGCTCCTTGTCTACTGGAGGAAGAGTCAGTGCAGTAAAGGCTGATTTAGGCAAAAT
TGTTCTTACTAATCCTGTCTGCACAGAAATTGGAGAAAAAATTGCCCTTAGTCGAAGAGTTGAGAAACATTGGCGTTTGA
TTGGCTGGGGTCAGATAAGAAGAGGAGTTACAATCAAGCCAACGGTAGATGATGATTAA
ATGGCGGGCGACGAGCCGGGAGTGACTCTGGGGCAGCCGCATCTGTCTCGCCAGGATTTGACCACTTTGGATGTTACCAA
GTTGACTCCGCTTTCACATGAAGTTATCAGCAGACAAGCCACGATCAATATAGGTACAATTGGTCATGTAGCACATGGAA
AGTCAACAGTAGTAAAAGCTATTTCTGGAGTTCACACTGTTCGATTCAAAAATGAGCTGGAAAGAAATATTACCATTAAA
TTGGGATATGCTAATGCTAAGATTTACCAACTTGATGACCCAAGTTGTTCTCGGCCAGAATGTTACAGATCTTGTGGAAG
TAGCACACCTGATGAATTTCCTACAGACATTCCAGGAACTAAAGGAAACTTTAAATTAGTCAGACATGTCTCCTTTGTGG
ATTGTCCTGGTCACGATATTTTGATGGCTACTATGCTGAACGGTGCAGCAGTCATGGATGCAGCTCTGTTATTAATAGCT
GGCAATGAGTCTTGTCCTCAGCCTCAGACTTCTGAGCACCTAGCTGCCATTGAAATCATGAAATTGAAACACATTCTGAT
TCTACAGAATAAGATTGATTTGGTGAAAGAAAGTCAGGCTAAGGAACAATATGAACAAATCCTTGCATTTGTACAAGGTA
CAGTTGCAGAGGGAGCTCCTATTATTCCAATTTCTGCTCAACTGAAGTATAATATTGAAGTTGTTTGTGAATATATAGTA
AAGAAAATTCCAGTACCTCCAAGAGACTTTACTTCAGAACCCAGACTTATTGTTATTCGGTCTTTTGACGTCAACAAGCC
TGGTTGTGAAGTTGATGACCTTAAGGGTGGTGTGGCTGGTGGTAGTATTCTCAAAGGAGTATTAAAGGTGGGACAGGAGT
TGGAGGTCAGGCCTGGCATTGTCTCTAAAGATAGTGAAGGGAAACTCATGTGTAAGCCAATCTTTTCCAAAATTGTATCA
CTTTTTGCAGAGCATAATGACCTGCAGTATGCTGCTCCTGGAGGCCTTATTGGGGTTGGAACAAAAATTGATCCAACTTT
GTGCCGAGCTGACAGAATGGTGGGACAGGTTCTTGGTGCAGTTGGAGCATTGCCTGAAATCTTTACAGAATTGGAAATTT
CCTATTTCCTGCTTAGAAGACTTTTAGGAGTGCGCACTGAAGGAGACAAAAAAGCAGCGAAAGTACAAAAATTGTCCAAG
AATGAAGTGCTCATGGTGAACATAGGCTCCTTGTCTACTGGAGGAAGAGTCAGTGCAGTAAAGGCTGATTTAGGCAAAAT
TGTTCTTACTAATCCTGTCTGCACAGAAATTGGAGAAAAAATTGCCCTTAGTCGAAGAGTTGAGAAACATTGGCGTTTGA
TTGGCTGGGGTCAGATAAGAAGAGGAGTTACAATCAAGCCAACGGTAGATGATGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014337 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000018584 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000017343 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000341 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000011052 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006979 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000035150 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020194 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002533 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012178 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007144 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012474 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_732 | 94.91 | 95.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1650 | 83.33 | 56.57 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000007541 retrocopies