Parental gene:

EIF2S3, ENSPPYG00000020194

Aliases:None
Description:eukaryotic translation initiation factor 2 subunit 3 [Source:RefSeq peptide;Acc:NP_001125875]
Organism:Orangutan (Pongo abelii)
Coordinates:X:24173805..24198032(+)


>ENSPPYG00000020194
ATGGCGGGCGGAGAAGCTGGAGTGACTCTAGGGCAGCCGCATCTTTCGCGTCAGGATCTCACCACCTTGGATGTTACCAA
GTTGACGCCACTTTCACACGAAGTTATCAGCAGGCAAGCCACAATTAACATAGGTACAATTGGTCATGTAGCTCATGGGA
AATCCACAGTCGTCAAAGCTATTTCTGGAGTTCATACTGTCAGGTTCAAAAATGAACTAGAAAGAAATATTACAATCAAG
CTTGGATATGCTAATGCTAAGATTTATAAGCTTGATGACCCAAGTTGCCCTCGGCCAGAATGTTATAGATCTTGTGGGAG
CAGTACACCTGATGAGTTTCCTACAGACATTCCAGGGACCAAAGGGAACTTCAAATTAGTCAGACATGTTTCCTTTGTTG
ACTGTCCTGGCCACGATATTTTGATGGCTACTATGCTGAACGGTGCAGCAGTGATGGATGCAGCTCTTCTGTTGATAGCT
GGTAATGAATCTTGCCCTCAGCCTCAGACATCTGAACACCTGGCTGCTATAGAGATCATGAAACTGAAGCATATTTTGAT
TCTACAAAATAAAATTGATTTGGTAAAAGAAAGTCAGGCTAAAGAACAATACGAGCAGATCCTTGCATTTGTCCAAGGTA
CAGTAGCAGAGGGAGCTCCCATTATTCCAATTTCGGCTCAGCTGAAATACAATATTGAAGTTGTTTGTGAGTACATAGTA
AAGAAAATTCCAGTACCCCCAAGAGACTTTACTTCAGAGCCCCGGCTTATTGTTATTAGATCTTTTGATGTCAACAAACC
TGGCTGTGAAGTTGATGACCTTAAGGGAGGTGTAGCTGGTGGTAGTATCCTAAAAGGAGTATTAAAGGTGGGCCAGGAGA
TAGAAGTAAGACCTGGTATTGTTTCCAAAGATAGTGAAGGAAAACTCATGTGTAAACCAATCTTTTCCAAAATTGTATCA
CTTTTTGCGGAGCATAATGATCTGCAATATGCTGCTCCAGGCGGTCTTATTGGAGTTGGAACAAAAATTGACCCCACTTT
GTGCCGGGCTGACAGAATGGTGGGGCAAGTACTTGGTGCAGTCGGAGCTTTACCTGAGATATTCACAGAATTGGAAATTT
CCTATTTCCTGCTTAGACGGCTTCTAGGTGTACGCACTGAAGGAGACAAGAAAGCAGCAAAGGTTCAAAAGCTGTCTAAG
AATGAAGTGCTCATGGTGAACATAGGATCCCTGTCGACAGGAGGGAGAGTTAGTGCTGTCAAGGCCGATTTGGGTAAAAT
TGTTTTGACCAATCCAGTGTGCACAGAGGTAGGAGAAAAAATTGCCCTTAGCCGAAGAGTTGAAAAACACTGGCGTTTAA
TTGGTTGGGGTCAGATAAGAAGAGGAGTGACAATCAAGCCAACAGTAGATGATGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 58 .50 RPM
SRP007412_cerebellum 45 .24 RPM
SRP007412_heart 37 .87 RPM
SRP007412_kidney 89 .50 RPM
SRP007412_liver 53 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014337 ortholog_many2many 1 retrogene
retro_btau_1497,
Dasypus novemcinctus ENSDNOG00000018584 ortholog_one2many 1 retrogene
retro_dnov_1454,
Equus caballus ENSECAG00000017343 ortholog_many2many 1 retrogene
retro_ecab_810,
Echinops telfairi ENSETEG00000000341 ortholog_one2many 4 retrogenes
retro_etel_1061, retro_etel_126, retro_etel_1590, retro_etel_2017,
Loxodonta africana ENSLAFG00000011052 ortholog_one2many 1 retrogene
retro_lafr_971,
Macaca mulatta ENSMMUG00000006979 ortholog_many2many 4 retrogenes
retro_mmul_1965, retro_mmul_2258, retro_mmul_473, retro_mmul_713,
Monodelphis domestica ENSMODG00000007541 ortholog_one2many 2 retrogenes
retro_mdom_1650, retro_mdom_732,
Mus musculus ENSMUSG00000035150 possible_ortholog 2 retrogenes
retro_mmus_1408, retro_mmus_3433,
Pteropus vampyrus ENSPVAG00000002533 ortholog_one2many 1 retrogene
retro_pvam_936,
Sus scrofa ENSSSCG00000012178 possible_ortholog 1 retrogene
retro_sscr_805,
Ictidomys tridecemlineatus ENSSTOG00000007144 possible_ortholog 1 retrogene
retro_itri_582,
Tursiops truncatus ENSTTRG00000012474 ortholog_one2many 4 retrogenes
retro_ttru_1080, retro_ttru_1638, retro_ttru_617, retro_ttru_686,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_10 98.52 100.00
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Download FASTA sequences of all ENSPPYG00000020194 retrocopies