Parental gene:

SRP14, ENSECAG00000000319

Aliases:None
Description:signal recognition particle 14kDa (homologous Alu RNA binding protein) [Source:HGNC Symbol;Acc:11299]
Organism:Horse (Equus caballus)
Coordinates:1:148440008..148443000(+)


>ENSECAG00000000319
ATGGTGCTGCTGGAGAGCGAGCAGTTCCTGACGGAGCTGACCAGGCTCTTCCAGAAGTGCCGGCTGTCGGGCAGCGTGTT
CATCACCCTGAAGAAGTATGACGGTCGAACTAAGCCCATTCCCAGGAAAGGTTCCGTGGAGGGCTTTGAGCCCTCAGACA
ACAAGTGTCTGTTGAGAGCTACTGATGGGAAGAAGAAGATCAGCACCGTGGTGAGCTCCAAAGAAGTGAATAAGTTTCAG
ATGGCTTATTCAAACCTCTTAAGAGCCAACATGGACGGGCTGAAGAAGAGGGACAAAAAGAGCAAGAGTAAGAAGAGCAA
AGCAGCACAGTGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 30 .05 RPM
SRP021940_cerebellum 62 .27 RPM
SRP021940_embryo 34 .04 RPM
SRP021940_placental_villous 42 .82 RPM
SRP021940_synovial_membrane 33 .85 RPM
SRP021940_testis 73 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029889 possible_ortholog 2 retrogenes
retro_cfam_210, retro_cfam_40,
Callithrix jacchus ENSCJAG00000020912 possible_ortholog 3 retrogenes
retro_cjac_1642, retro_cjac_171, retro_cjac_3057,
Echinops telfairi ENSETEG00000011870 ortholog_one2one 1 retrogene
retro_etel_1094,
Gorilla gorilla ENSGGOG00000009921 possible_ortholog 1 retrogene
retro_ggor_665,
Microcebus murinus ENSMICG00000007637 ortholog_one2one 1 retrogene
retro_mmur_487,
Macaca mulatta ENSMMUG00000016061 possible_ortholog 4 retrogenes
retro_mmul_1228, retro_mmul_1740, retro_mmul_573, retro_mmul_780,
Monodelphis domestica ENSMODG00000029204 ortholog_one2one 1 retrogene
retro_mdom_1806,
Mustela putorius furo ENSMPUG00000008324 ortholog_one2one 1 retrogene
retro_mputfur_376,
Otolemur garnettii ENSOGAG00000029070 possible_ortholog 2 retrogenes
retro_ogar_2839, retro_ogar_40,
Pongo abelii ENSPPYG00000006342 possible_ortholog 3 retrogenes
retro_pabe_1534, retro_pabe_262, retro_pabe_811,
Pteropus vampyrus ENSPVAG00000002186 ortholog_one2one 2 retrogenes
retro_pvam_152, retro_pvam_323,
Ictidomys tridecemlineatus ENSSTOG00000015627 ortholog_one2one 9 retrogenes
retro_itri_1334, retro_itri_1501, retro_itri_1633, retro_itri_382, retro_itri_432, retro_itri_707, retro_itri_710, retro_itri_799, retro_itri_824,
Tursiops truncatus ENSTTRG00000000036 ortholog_one2one 5 retrogenes
retro_ttru_1185, retro_ttru_1288, retro_ttru_594, retro_ttru_74, retro_ttru_782,
Vicugna pacos ENSVPAG00000010282 possible_ortholog 1 retrogene
retro_vpac_20,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_817 71.08 74.55
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Download FASTA sequences of all ENSECAG00000000319 retrocopies