Parental gene:

EEF1G, ENSECAG00000014334

Aliases:None
Description:Elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:A2Q127]
Organism:Horse (Equus caballus)
Coordinates:12:22851399..22860721(-)


>ENSECAG00000014334
ATGGCGGCTGGGACCCTGTACACATATCCTGAAAACTGGAGGGCCTTCAAGGCTCTCATCGCCGCCCAGTACAGCGGGGC
TCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCACTTTGGCCAAACCAACCGCACCCCTGAGTTTCTCCGTAAATTTC
CTGCCGGCAAGGTTCCAGCATTTGAGGGTGATGATGGGTTCTGTGTGTTTGAGAGCAATGCCATTGCTTACTATGTGAGC
AATGAAGAACTGCGGGGAAGTACTCCAGAGGCAGCAGCCCAGGTGGTCCAGTGGGTGAGCTTTGCTGATAGTGACATAGT
GCCCCCAGCCAGTACCTGGGTGTTCCCCACCTTGGGCATCATGCACCACAACAAGCAGGCCACAGAGAACGCAAAGGAGG
AGGTGAGGCGAATTCTGGGGCTGCTGGATGCTCACTTGAAGACGAGGACTTTTCTGGTGGGCGAACGAGTTACGCTGGCT
GACATCACAGTTGTCTGCACCCTGTTGTGGCTCTACAAACAGGTCCTGGAGCCTTCTTTCCGCCAGGCCTTCCCCAATAC
CAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTCCGGGCTGTCTTGGGGGAGGTGAAGCTCTGTGAGAAGATGG
CCCAGTTTGATGCTAAAAAATTTGCAGAGAGCCAGCCTAAAAAGGACACCCCAAGGAAAGAGAAGGGTTCTCGGGAGGAG
AAGCAGAAGCCACAGGCTGAGCGGAAAGAGGAGAAAAAGGCGGCTGCTCCTGCTCCTGAGGAGGAGATGGATGAATGTGA
GCAGGCGCTGGCTGCTGAGCCAAAAGCCAAGGACCCCTTTGCTCACCTGCCCAAGAGTACCTTTGTGTTGGATGAATTTA
AGCGCAAGTACTCCAATGAGGACACACTCTCTGTGGCGCTGCCGTATTTTTGGGAGCACTTTGACAAGGATGGCTGGTCC
CTGTGGTACTCTGAGTACCGCTTCCCTGAAGAGCTCACCCAGACCTTCATGAGTTGCAACCTCATCACTGGAATGTTCCA
GCGATTGGACAAGCTGAGGAAGAATGCCTTTGCCAGCGTCATCCTCTTTGGAACCAACAATAGCAGCTCCATTTCTGGAG
TCTGGGTCTTCCGAGGCCAGGAGCTCGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTACGAGTCATATACATGGCGG
AAACTGGATCCTGGCAGCGAGGAGGCCCAGACGCTGGTTCGAGAGTACTTTTCCTGGGAGGGGGCCTTCCAGCATGTGGG
CAAAGCCTTCAATCAGGGCAAGATCTTCAAGTGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 1823 .55 RPM
SRP021940_cerebellum 600 .03 RPM
SRP021940_embryo 1262 .04 RPM
SRP021940_placental_villous 446 .95 RPM
SRP021940_synovial_membrane 1023 .03 RPM
SRP021940_testis 894 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006745 ortholog_one2one 1 retrogene
retro_amel_772,
Canis familiaris ENSCAFG00000015834 ortholog_one2many 6 retrogenes
retro_cfam_1241, retro_cfam_1398, retro_cfam_1862, retro_cfam_478, retro_cfam_638, retro_cfam_653,
Callithrix jacchus ENSCJAG00000018949 ortholog_one2one 6 retrogenes
retro_cjac_1464, retro_cjac_1770, retro_cjac_1942, retro_cjac_3147, retro_cjac_841, retro_cjac_874,
Latimeria chalumnae ENSLACG00000014700 ortholog_one2one 1 retrogene
retro_lcha_82,
Loxodonta africana ENSLAFG00000003339 ortholog_one2one 1 retrogene
retro_lafr_381,
Monodelphis domestica ENSMODG00000007691 possible_ortholog 1 retrogene
retro_mdom_68,
Mustela putorius furo ENSMPUG00000013942 ortholog_one2one 2 retrogenes
retro_mputfur_427, retro_mputfur_944,
Nomascus leucogenys ENSNLEG00000003528 possible_ortholog 2 retrogenes
retro_nleu_1510, retro_nleu_681,
Oryctolagus cuniculus ENSOCUG00000020959 ortholog_one2one 3 retrogenes
retro_ocun_1693, retro_ocun_369, retro_ocun_693,
Pongo abelii ENSPPYG00000029434 ortholog_one2one 5 retrogenes
retro_pabe_2237, retro_pabe_2378, retro_pabe_2409, retro_pabe_2473, retro_pabe_3690,
Pan troglodytes ENSPTRG00000003768 possible_ortholog 3 retrogenes
retro_ptro_1879, retro_ptro_2017, retro_ptro_3159,
Rattus norvegicus ENSRNOG00000020075 possible_ortholog 8 retrogenes
retro_rnor_1312, retro_rnor_2126, retro_rnor_2235, retro_rnor_2269, retro_rnor_2468, retro_rnor_2617, retro_rnor_2928, retro_rnor_979,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_419 69.92 89.93
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Download FASTA sequences of all ENSECAG00000014334 retrocopies