Parental gene: | EEF1G, ENSPPYG00000029434 |
| Aliases: | None |
| Description: | eukaryotic translation elongation factor 1 gamma [Source:HGNC Symbol;Acc:3213] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 11:13603673..13616043(+) |
>ENSPPYG00000029434
ATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGGAAGTGAGGCGAATTCTGGGGCTGCTGGATGCTTACTTGAA
GACGAGGACTTTTCTGGTGGGCGAACGAGTGACATTGGCTGACATCACAGTTGTCTGCACCCTGTTGTGGCTCTACAAGC
AGGTTCTAGAGCCTTCTTTCCGCCAGGCCTTTCCCAATACCAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTC
CGGGCTGTCTTGGGGGAAGTGAAACTGTGTGAGAAGATGGCCCAGTTTGATGCTAAAAAGTTTGCAGAGACCCAACCTAA
AAAGGACACACCACGGAAAGAGAAGGGTTCACGGGAAGAGAAGCAGAAGCCCCAGGCTGAGCGGAAGGAGGAGAAAAAGG
CAGCTGCCCCTGCTCCTGAGGAGGAGATGGATGAATGTGAGCAGGCGCTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTC
GCTCACCTGCCCAAGAGTACCTTTGTGTTGGATGAATTTAAGCGCAAGTACTCCAATGAGGACACACTCTCTGTGGCACT
GCCATATTTCTGGGAGCACTTTGATAAGGACGGCTGGTCCCTGTGGTACTCAGAGTATCGCTTCCCTGAAGAACTCACTC
AGACCTTCATGAGCTGCAATCTCATCACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 205 .63 RPM |
| SRP007412_cerebellum | 127 .19 RPM |
| SRP007412_heart | 351 .76 RPM |
| SRP007412_kidney | 555 .94 RPM |
| SRP007412_liver | 381 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006745 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000015834 | ortholog_one2many | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018949 | ortholog_one2one | 6 retrogenes | |
| Equus caballus | ENSECAG00000014334 | ortholog_one2one | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000014700 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003339 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007691 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013942 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003528 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000020959 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000003768 | possible_ortholog | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020075 | possible_ortholog | 8 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2237 | 76.89 | 94.92 | Please wait, loading  |
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| 2. | retro_pabe_2378 | 68.24 | 61.44 | Please wait, loading |
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| 3. | retro_pabe_2409 | 68.24 | 61.44 | Please wait, loading |
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| 4. | retro_pabe_2473 | 84.95 | 78.81 | Please wait, loading |
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| 5. | retro_pabe_3690 | 90.18 | 94.92 | Please wait, loading |
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Download FASTA sequences of all ENSPPYG00000029434 retrocopies