Parental gene:

AP3S2, ENSECAG00000024044

Aliases:None
Description:adaptor-related protein complex 3, sigma 2 subunit [Source:HGNC Symbol;Acc:571]
Organism:Horse (Equus caballus)
Coordinates:1:93469166..93515923(+)


>ENSECAG00000024044
TGGCGGGCGAAGATGATTCAGGCCATTCTGGTTTTCAACAACCACGGGAAGCCGCGGCTGGTCCGCTTCTACCAGCGTTT
CCCAGAAGAAATCCAGCAGCAGATTGTTCGAGAGACCTTCCATCTAGTTCTCAAGCGGGATGACAACATCTGTAACTTCT
TGGAGGGTGGAAGTTTGATTGGCGGCTCTGACTACAAGCTGATTTACCGGCACTATGCTACCCTCTACTTTGTATTTTGT
GTGGATTCATCGGAGAGTGAACTTGGAATCTTGGACCTCATCCAGGTTTTTGTGGAGACCTTGGATAAGTGTTTCGAAAA
TGTTTGTGAATTGGATTTGATCTTCCATATGGATAAGGTACACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGT
TGGAAACCAACATGAATGAAATCGTGGCTCAGATGGAAGCTCAGAACAGGCTGGAGAAATCCGAGGGTGGCCTCTCGGCA
GCCCCCGCCCGGGCCGTGTCTGCTGTGAAGAACATCAACCTGCCAGAGATCCCTCGGAACATCAACATCGGCGATCTCAA
CATCAAAGTCCCCAACCTGTCCCAGTTCGTCTGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 3 .25 RPM
SRP021940_cerebellum 8 .05 RPM
SRP021940_embryo 6 .09 RPM
SRP021940_placental_villous 4 .33 RPM
SRP021940_synovial_membrane 4 .89 RPM
SRP021940_testis 9 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001407 ortholog_one2one 1 retrogene
retro_btau_436,
Choloepus hoffmanni ENSCHOG00000003359 ortholog_one2one 4 retrogenes
retro_chof_1775, retro_chof_194, retro_chof_434, retro_chof_88,
Dipodomys ordii ENSDORG00000004247 ortholog_one2one 1 retrogene
retro_dord_115,
Felis catus ENSFCAG00000028122 ortholog_one2one 1 retrogene
retro_fcat_311,
Macropus eugenii ENSMEUG00000003421 ortholog_one2one 1 retrogene
retro_meug_2032,
Monodelphis domestica ENSMODG00000019522 ortholog_one2one 1 retrogene
retro_mdom_316,
Nomascus leucogenys ENSNLEG00000011780 ortholog_one2one 2 retrogenes
retro_nleu_1380, retro_nleu_1555,
Otolemur garnettii ENSOGAG00000030982 ortholog_one2one 1 retrogene
retro_ogar_1737,
Rattus norvegicus ENSRNOG00000043141 ortholog_one2one 1 retrogene
retro_rnor_931,
Sus scrofa ENSSSCG00000030174 ortholog_one2one 7 retrogenes
retro_sscr_1109, retro_sscr_199, retro_sscr_268, retro_sscr_339, retro_sscr_620, retro_sscr_721, retro_sscr_753,
Tursiops truncatus ENSTTRG00000015554 ortholog_one2one 2 retrogenes
retro_ttru_1233, retro_ttru_1361,
Vicugna pacos ENSVPAG00000008668 ortholog_one2one 1 retrogene
retro_vpac_54,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_549 67.65 50.25
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Download FASTA sequences of all ENSECAG00000024044 retrocopies