Parental gene:

AP3S2, ENSFCAG00000028122

Aliases:None
Description:adaptor-related protein complex 3, sigma 2 subunit [Source:HGNC Symbol;Acc:571]
Organism:Cat (Felis catus)
Coordinates:B3:5858383..5912878(+)


>ENSFCAG00000028122
ATGATTCAAGCGATTCTGGTTTTCAACAACCACGGGAAGCCGCGGCTGGTCCGCTTCTACCAGCGTTTCCCAGAAGAAAT
TCAACAGCAGATTGTCCGAGAGACCTTCCATCTAGTTCTCAAGCGAGATGACAACATCTGTAACTTCTTGGAAGGTGGAA
GTTTGATTGGTGGCTCCGACTACAAACTGATCTATCGGCACTATGCTACACTGTACTTTGTGTTTTGTGTGGATTCATCC
GAGAGTGAACTTGGAATCTTGGACCTCATCCAGGTTTTTGTGGAGACCCTGGATAAGTGTTTTGAAAATGTTTGTGAGTT
GGATTTGATCTTCCATATGGATAAGGTGCACTACATCCTTCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAAACCAACA
TGAATGAAATCGTGGCTCAGATCGAAGCTCAAAACAGGCTGGAGAAATCCGAGGGTGGCCTGTCAGCAGCCCCCGCCCGG
GCCGTGTCCGCTGTGAAAAACATCAATCTGCCGGAGATTCCTCGGAACATCAACATTGGTGATCTCAACATCAAAGTCCC
CAACCTGTCCCAGTTTGTC

Library Parental gene expression (RPM)
SRP017611_brain 12 .74 RPM
SRP017611_kidney 10 .82 RPM
SRP017611_liver 7 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001407 ortholog_one2one 1 retrogene
retro_btau_436,
Choloepus hoffmanni ENSCHOG00000003359 ortholog_one2one 4 retrogenes
retro_chof_1775, retro_chof_194, retro_chof_434, retro_chof_88,
Dipodomys ordii ENSDORG00000004247 ortholog_one2one 1 retrogene
retro_dord_115,
Equus caballus ENSECAG00000024044 ortholog_one2one 1 retrogene
retro_ecab_549,
Felis catus ENSFCAG00000029920 within_species_paralog 3 retrogenes
retro_fcat_1434, retro_fcat_151, retro_fcat_680,
Macropus eugenii ENSMEUG00000003421 ortholog_one2one 1 retrogene
retro_meug_2032,
Monodelphis domestica ENSMODG00000019522 ortholog_one2one 1 retrogene
retro_mdom_316,
Nomascus leucogenys ENSNLEG00000011780 ortholog_one2one 2 retrogenes
retro_nleu_1380, retro_nleu_1555,
Otolemur garnettii ENSOGAG00000030982 ortholog_one2one 1 retrogene
retro_ogar_1737,
Rattus norvegicus ENSRNOG00000043141 ortholog_one2one 1 retrogene
retro_rnor_931,
Sus scrofa ENSSSCG00000030174 ortholog_one2one 7 retrogenes
retro_sscr_1109, retro_sscr_199, retro_sscr_268, retro_sscr_339, retro_sscr_620, retro_sscr_721, retro_sscr_753,
Tursiops truncatus ENSTTRG00000015554 ortholog_one2one 2 retrogenes
retro_ttru_1233, retro_ttru_1361,
Vicugna pacos ENSVPAG00000008668 ortholog_one2one 1 retrogene
retro_vpac_54,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_311 72.44 65.28
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Download FASTA sequences of all ENSFCAG00000028122 retrocopies