Parental gene:

RPS8, ENSETEG00000004002

Aliases:None
Description:ribosomal protein S8 [Source:HGNC Symbol;Acc:10441]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_4464:844..3779(+)


>ENSETEG00000004002
ATGGGCATCTCTCGGGACAACTGGCACAAGCGCCGCAAGACCGGGGGCAAGAGAAAGCCCTACCACAAGAAGCGGAAGTA
TGAGCTGGGGCGCCCGGCTGCCAACACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATGAGCTGGTCCGGACCAAGACGCTGGTGAAGAACTGCATCGTGCTCGTTGACAGCACGCC
GTACCGCCAGTGGTACGAGTCTCACTATGCGCTGCCCCTGGGCCGGAAGAAGGGGGCTAAGCTAACTCCTGAAGAGGAAG
AGACATTAAATAAGAAGCGGTCAAAGAAAATTCAGAAGAAATATGATGAACGGAAGAAGAACGCAAAAATCAGCAGTCTT
CTGGAGGAGCAGTTCCAGCAGGGCAAGCTTCTCGCCTGTATTGCGTCAAGGCCAGGCCAGTGTGGCCGAGCAGATGGCTA
TGTGCTAGAGGGGAAGGAGCTGGAGTTTTATTTGAGGAAGATCAAAGCTCGAAAAGGCAAATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015697 ortholog_one2one 1 retrogene
retro_acar_124,
Choloepus hoffmanni ENSCHOG00000008785 ortholog_one2one 10 retrogenes
retro_chof_1197, retro_chof_1258, retro_chof_1466, retro_chof_1638, retro_chof_2066, retro_chof_2617, retro_chof_2633, retro_chof_274, retro_chof_331, retro_chof_951,
Callithrix jacchus ENSCJAG00000004197 possible_ortholog 5 retrogenes
retro_cjac_1068, retro_cjac_181, retro_cjac_3138, retro_cjac_6, retro_cjac_951,
Dipodomys ordii ENSDORG00000009287 possible_ortholog 1 retrogene
retro_dord_429,
Felis catus ENSFCAG00000022996 possible_ortholog 4 retrogenes
retro_fcat_1222, retro_fcat_200, retro_fcat_456, retro_fcat_962,
Gorilla gorilla ENSGGOG00000005645 possible_ortholog 5 retrogenes
retro_ggor_1127, retro_ggor_1170, retro_ggor_1357, retro_ggor_1465, retro_ggor_556,
Myotis lucifugus ENSMLUG00000001559 possible_ortholog 30 retrogenes
retro_mluc_1114, retro_mluc_1132, retro_mluc_1165, retro_mluc_1277, retro_mluc_1288, retro_mluc_1418, retro_mluc_1467, retro_mluc_1476, retro_mluc_1486, retro_mluc_1634, retro_mluc_1656, retro_mluc_1689, retro_mluc_1808, retro_mluc_1911, retro_mluc_1938, retro_mluc_2043, retro_mluc_2055, retro_mluc_2085, retro_mluc_2111, retro_mluc_2153, retro_mluc_2182, retro_mluc_2209, retro_mluc_2414, retro_mluc_460, retro_mluc_662, retro_mluc_730, retro_mluc_773, retro_mluc_820, retro_mluc_821, retro_mluc_906,
Macaca mulatta ENSMMUG00000015270 possible_ortholog 2 retrogenes
retro_mmul_275, retro_mmul_70,
Monodelphis domestica ENSMODG00000028389 ortholog_one2one 1 retrogene
retro_mdom_998,
Nomascus leucogenys ENSNLEG00000014147 possible_ortholog 1 retrogene
retro_nleu_34,
Oryctolagus cuniculus ENSOCUG00000012476 possible_ortholog 1 retrogene
retro_ocun_168,
Otolemur garnettii ENSOGAG00000006922 possible_ortholog 16 retrogenes
retro_ogar_1156, retro_ogar_1746, retro_ogar_1895, retro_ogar_2501, retro_ogar_2529, retro_ogar_2556, retro_ogar_2699, retro_ogar_2723, retro_ogar_2947, retro_ogar_308, retro_ogar_3291, retro_ogar_3436, retro_ogar_394, retro_ogar_521, retro_ogar_730, retro_ogar_805,
Rattus norvegicus ENSRNOG00000018768 possible_ortholog 2 retrogenes
retro_rnor_222, retro_rnor_235,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_147 80.00 57.49
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2. retro_etel_302 68.22 50.72
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3. retro_etel_368 74.34 54.11
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4. retro_etel_395 55.66 50.24
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5. retro_etel_1000 95.87 57.97
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6. retro_etel_1063 84.35 55.56
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7. retro_etel_1201 66.39 56.52
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8. retro_etel_1495 77.39 54.59
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9. retro_etel_1733 75.45 52.66
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10. retro_etel_1864 72.27 56.52
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11. retro_etel_1941 92.44 57.49
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12. retro_etel_2050 70.73 57.00
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13. retro_etel_2060 66.39 55.56
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Download FASTA sequences of all ENSETEG00000004002 retrocopies