RetrogeneDB ID: | retro_etel_1864 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_309115:52131..52482(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS8 | ||
Ensembl ID: | ENSETEG00000004002 | ||
Aliases: | None | ||
Description: | ribosomal protein S8 [Source:HGNC Symbol;Acc:10441] |
Percent Identity: | 72.27 % |
Parental protein coverage: | 56.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LVRTKTLVKNCIVLVDSTPYRQWYESHYALPL-GRKKGAKLTPEEEETLNKKR-SKKIQKKYDERKKNAK |
LV.TKTLV.NCI.L.D.TPY..WYESHYA.P..G.KKG.K..PEEEE.LNK.R...K..KKYDERK.NAK | |
Retrocopy | LVHTKTLVENCIMLIDGTPYHHWYESHYAMPQ<GHKKGVKRIPEEEEILNKMR>KRKFKKKYDERKMNAK |
Parental | ISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARK |
ISSLLE.QFQQGKLL.C...RPGQCG.A.G.VLEG.EL.FYLRKIKA.K | |
Retrocopy | ISSLLE*QFQQGKLLECTTCRPGQCGDAEGCVLEGRELGFYLRKIKAQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |