Parental gene: | KRTCAP2, ENSFCAG00000025085 |
| Aliases: | None |
| Description: | keratinocyte associated protein 2 [Source:HGNC Symbol;Acc:28942] |
| Organism: | Cat (Felis catus) |
| Coordinates: | F1:67430609..67434140(+) |
>ENSFCAG00000025085
ACACTGATGCGGACCAGCGCGTCCATGATGCTCTCCTCCCTCCTGTCCCTGCTGCTGTTCGCCGGGATGCAGATGTACAG
CCGCCAGCTGGCCTCCACCGAGTGGCTCACCATCCAGGGGGGCCTGCTGGGCTCGGGCCTCTTCGTCTTCTCTCTCACCG
CCTTCAACAACCTGGAGAATCTGGTCTTTGGCAAAGGATTCCAAGCCAAGATCTTCCCCGAGATTCTTCTCTGCCTCCTG
TTGGCTCTCTTTGCATCCGGCCTCATTCACCGTGTCTGTGTCACCACCTGCTTCATTTTCTCCATGGTTGGCCTGTACTA
CATCAACAAGATCTCCTCCACGCTGTACCAGGCAACAGCTCCAGTCCTCGCCCCAGCCAAGGTCACGGGGAAGGGCAAAA
AGAGAAACTGA
ACACTGATGCGGACCAGCGCGTCCATGATGCTCTCCTCCCTCCTGTCCCTGCTGCTGTTCGCCGGGATGCAGATGTACAG
CCGCCAGCTGGCCTCCACCGAGTGGCTCACCATCCAGGGGGGCCTGCTGGGCTCGGGCCTCTTCGTCTTCTCTCTCACCG
CCTTCAACAACCTGGAGAATCTGGTCTTTGGCAAAGGATTCCAAGCCAAGATCTTCCCCGAGATTCTTCTCTGCCTCCTG
TTGGCTCTCTTTGCATCCGGCCTCATTCACCGTGTCTGTGTCACCACCTGCTTCATTTTCTCCATGGTTGGCCTGTACTA
CATCAACAAGATCTCCTCCACGCTGTACCAGGCAACAGCTCCAGTCCTCGCCCCAGCCAAGGTCACGGGGAAGGGCAAAA
AGAGAAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 17 .69 RPM |
| SRP017611_kidney | 30 .09 RPM |
| SRP017611_brain | 14 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011336 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000017055 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009017 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000163463 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009303 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012180 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000005647 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011864 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000347 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000030271 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000756 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001410 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020542 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000008829 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013228 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_477 | 82.71 | 96.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_576 | 78.03 | 95.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_1496 | 70.40 | 90.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000025085 retrocopies