Parental gene:

PPP2CA, ENSSHAG00000016632

Aliases:None
Description:protein phosphatase 2, catalytic subunit, alpha isozyme [Source:HGNC Symbol;Acc:9299]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834577.1:2260187..2334174(+)


>ENSSHAG00000016632
ATGGACGAGAAGGTCTTCACCAAGGAGCTGGACCAGTGGATCGAGCAGCTTAATGAATGCAAGCAACTCTCGGAGTCCCA
GGTCAAGAGTCTCTGTGAAAAGGCTAAAGAAATCCTTACAAAGGAGTCCAATGTACAAGAGGTGCGATGTCCAGTCACTG
TCTGTGGAGATGTTCATGGGCAATTTCATGATCTCATGGAACTTTTTAGAATTGGTGGCAAATCACCAGACACAAATTAC
TTGTTTATGGGTGATTATGTTGACAGAGGATATTATTCAGTTGAAACAGTAACGCTGCTTGTAGCTCTTAAGGTTCGTTA
CCGTGAACGTATCACTATTCTTCGAGGAAATCATGAGAGTAGACAAATCACACAAGTATATGGTTTCTATGATGAGTGTT
TAAGGAAATATGGAAATGCAAATGTTTGGAAATATTTTACAGACCTTTTTGATTATCTTCCTCTAACTGCCTTGGTGGAT
GGTCAGATATTCTGTCTACATGGTGGTCTCTCACCATCCATAGATACACTGGATCATATCAGAGCACTTGATCGCCTACA
AGAAGTTCCCCATGAGGGTCCAATGTGTGACTTGCTTTGGTCAGATCCAGATGACCGTGGTGGTTGGGGTATTTCTCCTC
GAGGTGCTGGATATACATTTGGACAAGATATTTCAGAGACATTTAATCATGCCAATGGCCTCACATTGGTATCCAGAGCT
CACCAGCTGGTGATGGAGGGATATAATTGGTGCCATGACAGGAATGTAGTAACAATATTCAGTGCTCCAAATTATTGTTA
CCGTTGTGGTAACCAAGCTGCAATCATGGAACTTGATGATACTCTAAAGTACTCTTTCTTGCAGTTTGACCCAGCACCAC
GTAGAGGTGAACCACATGTTACTCGTCGTACCCCAGACTACTTCCTATGCCTTCAATTAAGTTGCAGAGCTCTGATGGAG
AGATATTTGAAGTTGATGTTGAAATTGCAAAACAGTCTGTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002653 ortholog_one2one 1 retrogene
retro_acar_69,
Bos taurus ENSBTAG00000000469 ortholog_one2one 1 retrogene
retro_btau_1754,
Callithrix jacchus ENSCJAG00000013634 ortholog_one2one 2 retrogenes
retro_cjac_1346, retro_cjac_4113,
Dasypus novemcinctus ENSDNOG00000013011 ortholog_one2one 4 retrogenes
retro_dnov_1025, retro_dnov_1844, retro_dnov_2100, retro_dnov_2122,
Echinops telfairi ENSETEG00000007561 ortholog_one2one 2 retrogenes
retro_etel_1233, retro_etel_659,
Felis catus ENSFCAG00000029685 ortholog_one2one 1 retrogene
retro_fcat_1086,
Homo sapiens ENSG00000113575 ortholog_one2one 1 retrogene
retro_hsap_369,
Mustela putorius furo ENSMPUG00000010169 ortholog_one2one 1 retrogene
retro_mputfur_633,
Nomascus leucogenys ENSNLEG00000026729 ortholog_one2one 1 retrogene
retro_nleu_2441,
Otolemur garnettii ENSOGAG00000009695 ortholog_one2one 2 retrogenes
retro_ogar_3414, retro_ogar_921,
Rattus norvegicus ENSRNOG00000005389 ortholog_one2one 5 retrogenes
retro_rnor_1263, retro_rnor_1264, retro_rnor_1265, retro_rnor_1266, retro_rnor_817,
Sorex araneus ENSSARG00000005447 ortholog_one2one 3 retrogenes
retro_sara_296, retro_sara_385, retro_sara_715,
Ictidomys tridecemlineatus ENSSTOG00000010560 ortholog_one2one 1 retrogene
retro_itri_258,
Tursiops truncatus ENSTTRG00000016859 ortholog_one2one 1 retrogene
retro_ttru_1584,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_313 65.66 100.00
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2. retro_shar_428 78.92 54.35
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3. retro_shar_471 55.22 81.60
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Download FASTA sequences of all ENSSHAG00000016632 retrocopies