Parental gene:

PPP2CA, ENSACAG00000002653

Aliases:None
Description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:G1KB14]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:2:130843758..130864272(-)


>ENSACAG00000002653
ATGGAGGAGAAGGTCTTCACGAAGGAGCTGGACCAGTGGGTGGAGCAGCTGAACGAGTGCAAGCAGCTCTCCGAGGGGCA
AGTGAAGAGCCTCTGTGAGAAGGCTAAAGAAATCTTAACAAAAGAATCCAATGTACAAGAAGTACGATGTCCAGTAACAG
TTTGTGGAGATGTCCATGGACAATTTCATGATCTCATGGAACTTTTCAGAATTGGGGGCAAATCACCAGATACAAATTAC
TTATTTATGGGGGACTATGTTGACAGGGGATATTACTCTGTGGAAACCGTAACACTTCTGGTAGCTCTCAAGGTCCGTTA
TCGTGAACGCATCACTATCCTTCGAGGGAACCATGAAAGCAGGCAAATCACACAAGTTTATGGCTTCTATGATGAGTGCT
TAAGGAAATATGGAAACGCTAACGTATGGAAATATTTCACAGACCTTTTTGACTATCTTCCTCTAACTGCCTTGGTGGAT
GGCCAGATTTTCTGTCTACACGGTGGCCTCTCTCCGTCTATAGATACACTGGATCATATCAGAGCACTTGATCGCCTACA
AGAAGTTCCACATGAGGGTCCAATGTGCGATTTGCTGTGGTCAGACCCTGATGATCGTGGTGGTTGGGGCATTTCACCTC
GAGGAGCTGGTTACACTTTTGGGCAAGATATTTCAGAAACTTTCAACCATGCTAATGGCCTTACCTTGGTTTCAAGAGCT
CATCAGCTGGTAATGGAGGGATACAATTGGTGCCATGATCGGAATGTAGTAACAATTTTCAGTGCTCCAAATTACTGTTA
CCGTTGTGGTAACCAAGCTGCAATCATGGAACTGGATGATACTCTGAAATACTCATTTTTGCAGTTTGATCCTGCGCCAC
GCAGAGGTGAACCACATGTCACTCGTCGCACTCCAGACTACTTCCTGTAA

Library Parental gene expression (RPM)
SRP009831_adrenal 136 .54 RPM
SRP009831_brain 154 .23 RPM
SRP009831_dewlap 166 .09 RPM
SRP009831_embryo 225 .64 RPM
SRP009831_heart 60 .03 RPM
SRP009831_liver 58 .57 RPM
SRP009831_lung 68 .81 RPM
SRP009831_ovary 197 .37 RPM
SRP009831_skeletal_muscle 18 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000000469 ortholog_one2one 1 retrogene
retro_btau_1754,
Callithrix jacchus ENSCJAG00000013634 ortholog_one2one 2 retrogenes
retro_cjac_1346, retro_cjac_4113,
Dasypus novemcinctus ENSDNOG00000013011 ortholog_one2one 4 retrogenes
retro_dnov_1025, retro_dnov_1844, retro_dnov_2100, retro_dnov_2122,
Echinops telfairi ENSETEG00000007561 ortholog_one2one 2 retrogenes
retro_etel_1233, retro_etel_659,
Felis catus ENSFCAG00000029685 ortholog_one2one 1 retrogene
retro_fcat_1086,
Homo sapiens ENSG00000113575 ortholog_one2one 1 retrogene
retro_hsap_369,
Mustela putorius furo ENSMPUG00000010169 ortholog_one2one 1 retrogene
retro_mputfur_633,
Nomascus leucogenys ENSNLEG00000026729 ortholog_one2one 1 retrogene
retro_nleu_2441,
Otolemur garnettii ENSOGAG00000009695 ortholog_one2one 2 retrogenes
retro_ogar_3414, retro_ogar_921,
Rattus norvegicus ENSRNOG00000005389 ortholog_one2one 5 retrogenes
retro_rnor_1263, retro_rnor_1264, retro_rnor_1265, retro_rnor_1266, retro_rnor_817,
Sorex araneus ENSSARG00000005447 ortholog_one2one 3 retrogenes
retro_sara_296, retro_sara_385, retro_sara_715,
Sarcophilus harrisii ENSSHAG00000016632 ortholog_one2one 3 retrogenes
retro_shar_313, retro_shar_428, retro_shar_471,
Ictidomys tridecemlineatus ENSSTOG00000010560 ortholog_one2one 1 retrogene
retro_itri_258,
Tursiops truncatus ENSTTRG00000016859 ortholog_one2one 1 retrogene
retro_ttru_1584,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_69 88.11 59.87
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Download FASTA sequences of all ENSACAG00000002653 retrocopies