Parental gene:

GABARAPL2, ENSG00000034713

Aliases:GABARAPL2, ATG8, ATG8C, GATE-16, GATE16, GEF-2, GEF2
Description:GABA(A) receptor-associated protein-like 2 [Source:HGNC Symbol;Acc:13291]
Organism:Human (Homo sapiens)
Coordinates:16:75600248..75611779(+)


>ENSG00000034713
ATGAAGTGGATGTTCAAGGAGGACCACTCGCTGGAACACAGATGCGTGGAGTCCGCGAAGATTCGAGCGAAATATCCCGA
CAGGGTTCCGGTGATTGTGGAAAAGGTCTCAGGCTCTCAGATTGTTGACATTGACAAACGGAAGTACTTGGTTCCATCTG
ATATCACTGTGGCTCAGTTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCTTCTGAAAAGGCGATCTTCCTGTTTGTG
GATAAGACAGTCCCACAGTCCAGCCTAACTATGGGACAGCTTTACGAGAAGGAAAAAGATGAAGATGGATTCTTATATGT
GGCCTACAGCGGAGAGAACACTTTTGGCTTCTGA

Library Parental gene expression (RPM)
bodymap2_liver 34 .54 RPM
bodymap2_lung 123 .82 RPM
bodymap2_breast 74 .22 RPM
bodymap2_adipose 59 .89 RPM
bodymap2_adrenal 49 .58 RPM
bodymap2_skeletal_muscle 72 .53 RPM
bodymap2_thyroid 84 .14 RPM
bodymap2_prostate 93 .42 RPM
bodymap2_colon 81 .11 RPM
bodymap2_testis 100 .02 RPM
bodymap2_brain 161 .43 RPM
bodymap2_heart 123 .78 RPM
bodymap2_white_blood_cells 96 .84 RPM
bodymap2_lymph_node 90 .60 RPM
bodymap2_ovary 75 .16 RPM
bodymap2_kidney 90 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005453 ortholog_one2one 2 retrogenes
retro_amel_1054, retro_amel_1238,
Callithrix jacchus ENSCJAG00000014253 possible_ortholog 1 retrogene
retro_cjac_146,
Dasypus novemcinctus ENSDNOG00000002240 ortholog_one2one 2 retrogenes
retro_dnov_1755, retro_dnov_2332,
Homo sapiens ENSG00000139112 within_species_paralog 1 retrogene
retro_hsap_60,
Homo sapiens ENSG00000140941 within_species_paralog 3 retrogenes
retro_hsap_3695, retro_hsap_487, retro_hsap_62,
Gorilla gorilla ENSGGOG00000012299 ortholog_one2one 2 retrogenes
retro_ggor_2761, retro_ggor_342,
Loxodonta africana ENSLAFG00000017065 ortholog_one2one 2 retrogenes
retro_lafr_234, retro_lafr_543,
Myotis lucifugus ENSMLUG00000015112 ortholog_one2one 1 retrogene
retro_mluc_1207,
Macaca mulatta ENSMMUG00000005759 ortholog_one2one 2 retrogenes
retro_mmul_2369, retro_mmul_540,
Nomascus leucogenys ENSNLEG00000013048 ortholog_one2one 2 retrogenes
retro_nleu_1560, retro_nleu_580,
Pongo abelii ENSPPYG00000007565 ortholog_one2one 2 retrogenes
retro_pabe_3368, retro_pabe_372,
Pan troglodytes ENSPTRG00000008362 ortholog_one2one 2 retrogenes
retro_ptro_250, retro_ptro_2794,
Rattus norvegicus ENSRNOG00000019425 ortholog_one2one 1 retrogene
retro_rnor_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4115 69.75 100.00
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Download FASTA sequences of all ENSG00000034713 retrocopies