Parental gene:

GABARAPL2, ENSPPYG00000007565

Aliases:None
Description:GABA(A) receptor-associated protein-like 2 [Source:HGNC Symbol;Acc:13291]
Organism:Orangutan (Pongo abelii)
Coordinates:16:62948430..62960424(+)


>ENSPPYG00000007565
ATGAAGTGGATGTTCAAGGAGGACCACTCGCTGGAACACAGATGCGTGGAGTCCGCGAAGATTCGAGCGAAATATCCCGA
CAGGGTTCCGGTGATTGTGGAAAAGGTCTCAGGCTCTCAGATTGTTGACATTGACAAACGGAAGTACTTGGTTCCATCTG
ATATCACTGTGGCTCAGTTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCTTCTGAAAAGGCGATCTTCCTGTTTGTG
GATAAGACAGTCCCACAGTCCAGCCTAACTATGGGACAGCTTTACGAGAAGGAAAAAGATGAAGATGGATTCTTGTATGT
GGCCTACAGCGGAGAGAACACTTTTGGCTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 72 .54 RPM
SRP007412_cerebellum 90 .96 RPM
SRP007412_heart 44 .28 RPM
SRP007412_kidney 39 .48 RPM
SRP007412_liver 22 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005453 ortholog_one2one 2 retrogenes
retro_amel_1054, retro_amel_1238,
Callithrix jacchus ENSCJAG00000014253 possible_ortholog 1 retrogene
retro_cjac_146,
Dasypus novemcinctus ENSDNOG00000002240 ortholog_one2one 2 retrogenes
retro_dnov_1755, retro_dnov_2332,
Homo sapiens ENSG00000034713 ortholog_one2one 1 retrogene
retro_hsap_4115,
Gorilla gorilla ENSGGOG00000012299 ortholog_one2one 2 retrogenes
retro_ggor_2761, retro_ggor_342,
Loxodonta africana ENSLAFG00000017065 ortholog_one2one 2 retrogenes
retro_lafr_234, retro_lafr_543,
Myotis lucifugus ENSMLUG00000015112 ortholog_one2one 1 retrogene
retro_mluc_1207,
Macaca mulatta ENSMMUG00000005759 ortholog_one2one 2 retrogenes
retro_mmul_2369, retro_mmul_540,
Nomascus leucogenys ENSNLEG00000013048 ortholog_one2one 2 retrogenes
retro_nleu_1560, retro_nleu_580,
Pongo abelii ENSPPYG00000007628 within_species_paralog 7 retrogenes
retro_pabe_1280, retro_pabe_1566, retro_pabe_245, retro_pabe_3157, retro_pabe_3158, retro_pabe_940, retro_pabe_978,
Pongo abelii ENSPPYG00000007901 within_species_paralog 1 retrogene
retro_pabe_122,
Pan troglodytes ENSPTRG00000008362 ortholog_one2one 2 retrogenes
retro_ptro_250, retro_ptro_2794,
Rattus norvegicus ENSRNOG00000019425 ortholog_one2one 1 retrogene
retro_rnor_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_372 55.68 71.79
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2. retro_pabe_3368 68.07 100.00
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Download FASTA sequences of all ENSPPYG00000007565 retrocopies