Parental gene:

RBM7, ENSG00000076053

Aliases:None
Description:RNA binding motif protein 7 [Source:HGNC Symbol;Acc:9904]
Organism:Human (Homo sapiens)
Coordinates:11:114270751..114284925(+)


>ENSG00000076053
ATGGGGGCGGCGGCGGCGGAAGCGGATCGCACTCTCTTTGTGGGCAACCTTGAAACGAAAGTGACCGAGGAGCTCCTTTT
CGAGCTTTTCCACCAGGCTGGGCCAGTAATAAAGGTGAAAATTCCAAAAGATAAGGATGGTAAACCAAAGCAGTTTGCGT
TTGTGAATTTCAAACATGAAGTGTCTGTTCCTTATGCAATGAATCTACTTAATGGAATCAAACTTTATGGAAGGCCTATC
AAAATTCAATTTAGATCAGGAAGTAGTCATGCCCCACAAGATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTC
AAGCCCTACCTCCACATCTCCTAGCAGGTACGAAAGGACTATGGATAACATGACTTCATCAGCACAGATAATTCAGAGAT
CTTTCTCTTCTCCAGAAAATTTTCAGAGACAAGCAGTGATGAACAGTGCTTTGAGACAAATGTCATATGGTGGAAAATTT
GGTTCTTCACCTCTGGATCAATCAGGATTTTCACCATCAGTTCAATCACACAGTCATAGTTTCAATCAGTCTTCAAGCTC
CCAGTGGCGCCAAGGTACACCATCATCACAGCGTAAAGTCAGAATGAATTCTTATCCCTACCTAGCAGATAGACATTATA
GCCGGGAACAGCGTTACACTGATCATGGGTCTGACCATCATTACAGAGGAAAGAGAGATGATTTCTTCTATGAAGACAGG
AATCATGATGACTGGAGCCATGACTATGATAACAGAAGAGACAGTAGTAGAGATGGAAAATGGCGCTCATCTCGACACTA
A

Library Parental gene expression (RPM)
bodymap2_liver 14 .20 RPM
bodymap2_lung 47 .27 RPM
bodymap2_breast 30 .06 RPM
bodymap2_adipose 29 .00 RPM
bodymap2_adrenal 27 .51 RPM
bodymap2_skeletal_muscle 17 .70 RPM
bodymap2_thyroid 28 .08 RPM
bodymap2_prostate 39 .35 RPM
bodymap2_colon 38 .46 RPM
bodymap2_testis 37 .39 RPM
bodymap2_brain 12 .68 RPM
bodymap2_heart 14 .64 RPM
bodymap2_white_blood_cells 35 .20 RPM
bodymap2_lymph_node 31 .36 RPM
bodymap2_ovary 51 .82 RPM
bodymap2_kidney 32 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013514 ortholog_one2many 1 retrogene
retro_cfam_1021,
Choloepus hoffmanni ENSCHOG00000012747 ortholog_one2many 1 retrogene
retro_chof_570,
Homo sapiens ENSG00000143368 within_species_paralog 1 retrogene
retro_hsap_1356,
Gorilla gorilla ENSGGOG00000009941 ortholog_one2many 1 retrogene
retro_ggor_1696,
Loxodonta africana ENSLAFG00000012444 ortholog_one2many 1 retrogene
retro_lafr_892,
Myotis lucifugus ENSMLUG00000023234 ortholog_one2many 2 retrogenes
retro_mluc_1555, retro_mluc_587,
Monodelphis domestica ENSMODG00000013918 ortholog_one2many 1 retrogene
retro_mdom_535,
Mus musculus ENSMUSG00000042396 ortholog_one2many 1 retrogene
retro_mmus_2436,
Nomascus leucogenys ENSNLEG00000007323 ortholog_one2many 1 retrogene
retro_nleu_409,
Oryctolagus cuniculus ENSOCUG00000003342 ortholog_one2many 1 retrogene
retro_ocun_924,
Otolemur garnettii ENSOGAG00000016857 ortholog_one2many 1 retrogene
retro_ogar_3103,
Pongo abelii ENSPPYG00000003894 ortholog_one2many 1 retrogene
retro_pabe_1669,
Pan troglodytes ENSPTRG00000004305 ortholog_one2many 1 retrogene
retro_ptro_1617,
Ictidomys tridecemlineatus ENSSTOG00000012459 ortholog_one2many 1 retrogene
retro_itri_889,
Tursiops truncatus ENSTTRG00000001515 ortholog_one2many 3 retrogenes
retro_ttru_1316, retro_ttru_1441, retro_ttru_478,
Vicugna pacos ENSVPAG00000006300 ortholog_one2many 1 retrogene
retro_vpac_311,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2283 94.53 95.49
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Download FASTA sequences of all ENSG00000076053 retrocopies