Parental gene:

PCNP, ENSG00000081154

Aliases:None
Description:PEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:30023]
Organism:Human (Homo sapiens)
Coordinates:3:101292938..101313281(+)


>ENSG00000081154
ATGGCGGACGGGAAGGCGGGAGACGAGAAGCCTGAAAAGTCGCAGCGAGCTGGAGCCGCCGGAGGACCTGAAGAAGAAGC
AGAAAAACCTGTGAAAACTAAGACTGTTTCTTCCAGTAATGGAGGGGAAAGTTCCAGTCGCAGCGCTGAGAAGCGATCAG
CTGAAGAAGAAGCTGCCGACCTCCCAACAAAGCCTACAAAGATCTCCAAGTTTGGATTTGCCATAGGTAGTCAGACGACA
AAGAAAGCATCAGCCATATCCATCAAACTTGGATCAAGTAAGCCTAAAGAAACTGTTCCAACTCTTGCTCCAAAAACTCT
TTCAGTAGCAGCAGCTTTTAATGAAGATGAAGATAGTGAACCAGAGGAAATGCCTCCAGAAGCAAAGATGAGGATGAAGA
ATATTGGAAGGGATACACCAACATCAGCTGGACCAAACTCCTTCAATAAAGGAAAGCATGGGTTTTCTGATAACCAGAAG
CTGTGGGAGCGAAATATAAAATCTCATCTTGGAAATGTCCATGACCAAGACAATTAA

Library Parental gene expression (RPM)
bodymap2_adipose 140 .40 RPM
bodymap2_adrenal 162 .77 RPM
bodymap2_brain 255 .29 RPM
bodymap2_breast 142 .14 RPM
bodymap2_colon 259 .06 RPM
bodymap2_heart 124 .85 RPM
bodymap2_kidney 176 .71 RPM
bodymap2_liver 51 .50 RPM
bodymap2_lung 266 .40 RPM
bodymap2_lymph_node 179 .19 RPM
bodymap2_ovary 248 .32 RPM
bodymap2_prostate 274 .14 RPM
bodymap2_skeletal_muscle 131 .83 RPM
bodymap2_testis 160 .16 RPM
bodymap2_thyroid 224 .13 RPM
bodymap2_white_blood_cells 161 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007972 ortholog_one2one 11 retrogenes
retro_chof_1170, retro_chof_1215, retro_chof_2070, retro_chof_2280, retro_chof_2290, retro_chof_2553, retro_chof_2575, retro_chof_594, retro_chof_651, retro_chof_806, retro_chof_819,
Callithrix jacchus ENSCJAG00000000508 possible_ortholog 6 retrogenes
retro_cjac_101, retro_cjac_1569, retro_cjac_1722, retro_cjac_3205, retro_cjac_3332, retro_cjac_401,
Dasypus novemcinctus ENSDNOG00000008873 ortholog_one2one 5 retrogenes
retro_dnov_1606, retro_dnov_259, retro_dnov_370, retro_dnov_910, retro_dnov_98,
Gorilla gorilla ENSGGOG00000025423 ortholog_one2one 4 retrogenes
retro_ggor_882, retro_ggor_901, retro_ggor_902, retro_ggor_994,
Loxodonta africana ENSLAFG00000005518 ortholog_one2one 2 retrogenes
retro_lafr_1189, retro_lafr_458,
Microcebus murinus ENSMICG00000008072 ortholog_one2one 10 retrogenes
retro_mmur_1010, retro_mmur_1138, retro_mmur_1286, retro_mmur_148, retro_mmur_1535, retro_mmur_1547, retro_mmur_1625, retro_mmur_167, retro_mmur_458, retro_mmur_887,
Macaca mulatta ENSMMUG00000017782 ortholog_one2one 3 retrogenes
retro_mmul_1312, retro_mmul_1377, retro_mmul_2598,
Mustela putorius furo ENSMPUG00000011696 possible_ortholog 1 retrogene
retro_mputfur_850,
Mus musculus ENSMUSG00000071533 ortholog_one2one 4 retrogenes
retro_mmus_2331, retro_mmus_2339, retro_mmus_2822, retro_mmus_3034,
Nomascus leucogenys ENSNLEG00000003224 ortholog_one2one 2 retrogenes
retro_nleu_2100, retro_nleu_2971,
Oryctolagus cuniculus ENSOCUG00000011110 ortholog_one2one 7 retrogenes
retro_ocun_1072, retro_ocun_1144, retro_ocun_1496, retro_ocun_1537, retro_ocun_573, retro_ocun_687, retro_ocun_868,
Procavia capensis ENSPCAG00000007007 ortholog_one2one 3 retrogenes
retro_pcap_161, retro_pcap_194, retro_pcap_273,
Pongo abelii ENSPPYG00000013591 ortholog_one2one 5 retrogenes
retro_pabe_1051, retro_pabe_1598, retro_pabe_3778, retro_pabe_935, retro_pabe_961,
Pan troglodytes ENSPTRG00000015172 ortholog_one2one 3 retrogenes
retro_ptro_676, retro_ptro_790, retro_ptro_864,
Rattus norvegicus ENSRNOG00000028411 ortholog_one2one 1 retrogene
retro_rnor_2138,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1130 64.39 100.00
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2. retro_hsap_1155 73.79 57.30
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3. retro_hsap_1264 92.20 78.65
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Download FASTA sequences of all ENSG00000081154 retrocopies