Parental gene:

ZCCHC9, ENSG00000131732

Aliases:ZCCHC9, PPP1R41
Description:zinc finger, CCHC domain containing 9 [Source:HGNC Symbol;Acc:25424]
Organism:Human (Homo sapiens)
Coordinates:5:80597408..80609116(+)


>ENSG00000131732
ATGACCAGGTGGGCCCGAGTTAGTACCACATATAACAAGAGACCCTTGCCTGCAACATCATGGGAGGACATGAAGAAGGG
ATCCTTTGAGGGAACAAGCCAAAACCTACCAAAGCGTAAACAACTTGAAGCCAATAGGCTATCCCTCAAAAATGATGCAC
CCCAAGCAAAACATAAAAAGAACAAAAAGAAAAAAGAGTACTTAAATGAAGATGTGAATGGATTCATGGAATACCTAAGA
CAGAATTCACAGATGGTTCACAATGGGCAAATTATAGCAACAGACAGTGAGGAAGTAAGGGAAGAAATTGCAGTTGCTTT
AAAGAAAGACAGTCGACGGGAAGGAAGAAGATTAAAAAGACAAGCGGCAAAGAAAAATGCAATGGTGTGTTTCCATTGTA
GAAAACCTGGTCATGGAATTGCAGATTGCCCCGCCGCCCTTGAAAATCAAGACATGGGCACTGGGATATGTTACAGGTGT
GGGTCCACAGAGCACGAAATAACCAAGTGTAAGGCTAAAGTAGACCCGGCTCTTGGCGAATTTCCTTTTGCAAAATGTTT
TGTTTGTGGAGAAATGGGGCACCTGTCTAGATCTTGTCCTGATAATCCCAAAGGACTCTATGCTGATGGTGGCGGTTGCA
AACTTTGTGGCTCTGTGGAACATTTAAAGAAAGATTGCCCTGAAAGTCAGAATTCAGAGCGAATGGTCACAGTTGGTCGC
TGGGCAAAGGGAATGAGTGCAGACTATGAAGAAATTTTGGATGTACCTAAACCGCAAAAACCCAAAACAAAAATACCTAA
AGTTGTTAATTTTTGA

Library Parental gene expression (RPM)
bodymap2_adipose 9 .84 RPM
bodymap2_adrenal 17 .17 RPM
bodymap2_brain 8 .60 RPM
bodymap2_breast 17 .53 RPM
bodymap2_colon 17 .77 RPM
bodymap2_heart 5 .93 RPM
bodymap2_kidney 22 .03 RPM
bodymap2_liver 18 .00 RPM
bodymap2_lung 8 .32 RPM
bodymap2_lymph_node 19 .26 RPM
bodymap2_ovary 26 .16 RPM
bodymap2_prostate 25 .11 RPM
bodymap2_skeletal_muscle 7 .46 RPM
bodymap2_testis 20 .12 RPM
bodymap2_thyroid 15 .67 RPM
bodymap2_white_blood_cells 20 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005265 ortholog_one2many 1 retrogene
retro_btau_1095,
Canis familiaris ENSCAFG00000008703 ortholog_one2one 2 retrogenes
retro_cfam_1547, retro_cfam_675,
Choloepus hoffmanni ENSCHOG00000005268 ortholog_one2one 3 retrogenes
retro_chof_140, retro_chof_2143, retro_chof_268,
Callithrix jacchus ENSCJAG00000019486 ortholog_one2one 4 retrogenes
retro_cjac_1236, retro_cjac_2906, retro_cjac_3528, retro_cjac_909,
Echinops telfairi ENSETEG00000003838 ortholog_one2one 2 retrogenes
retro_etel_325, retro_etel_880,
Gorilla gorilla ENSGGOG00000013790 ortholog_one2one 1 retrogene
retro_ggor_706,
Myotis lucifugus ENSMLUG00000001886 ortholog_one2one 1 retrogene
retro_mluc_799,
Macaca mulatta ENSMMUG00000020655 ortholog_one2many 1 retrogene
retro_mmul_797,
Mus musculus ENSMUSG00000021621 ortholog_one2one 1 retrogene
retro_mmus_1920,
Otolemur garnettii ENSOGAG00000002543 possible_ortholog 6 retrogenes
retro_ogar_1467, retro_ogar_2125, retro_ogar_2426, retro_ogar_2941, retro_ogar_3076, retro_ogar_459,
Pongo abelii ENSPPYG00000015604 ortholog_one2one 1 retrogene
retro_pabe_1476,
Pan troglodytes ENSPTRG00000017047 ortholog_one2one 2 retrogenes
retro_ptro_1205, retro_ptro_602,
Rattus norvegicus ENSRNOG00000014927 ortholog_one2one 2 retrogenes
retro_rnor_1164, retro_rnor_2160,
Sorex araneus ENSSARG00000008580 ortholog_one2one 2 retrogenes
retro_sara_216, retro_sara_78,
Sarcophilus harrisii ENSSHAG00000014504 ortholog_one2one 1 retrogene
retro_shar_734,
Ictidomys tridecemlineatus ENSSTOG00000001407 ortholog_one2one 2 retrogenes
retro_itri_422, retro_itri_696,
Tursiops truncatus ENSTTRG00000013796 ortholog_one2one 1 retrogene
retro_ttru_819,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1799 77.58 60.89
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Download FASTA sequences of all ENSG00000131732 retrocopies