Parental gene:

BNIP3, ENSG00000176171

Aliases:None
Description:BCL2/adenovirus E1B 19kDa interacting protein 3 [Source:HGNC Symbol;Acc:1084]
Organism:Human (Homo sapiens)
Coordinates:10:133781577..133795435(-)


>ENSG00000176171
ATGTCGCAGAACGGAGCGCCCGGGATGCAGGAGGAGAGCCTGCAGGGCTCCTGGGTAGAACTGCACTTCAGCAATAATGG
GAACGGGGGCAGCGTTCCAGCCTCGGTTTCTATTTATAATGGAGACATGGAAAAAATACTGCTGGACGCACAGCATGAGT
CTGGACGGAGTAGCTCCAAGAGCTCTCACTGTGACAGCCCACCTCGCTCGCAGACACCACAAGATACCAACAGAGCTTCT
GAAACAGATACCCATAGCATTGGAGAGAAAAACAGCTCACAGTCTGAGGAAGATGATATTGAAAGAAGGAAAGAAGTTGA
AAGCATCTTGAAGAAAAACTCAGATTGGATATGGGATTGGTCAAGTCGGCCGGAAAATATTCCCCCCAAGGAGTTCCTCT
TTAAACACCCGAAGCGCACGGCCACCCTCAGCATGAGGAACACGAGCGTCATGAAGAAAGGGGGCATATTCTCTGCAGAA
TTTCTGAAAGTTTTCCTTCCATCTCTGCTGCTCTCTCATTTGCTGGCCATCGGATTGGGGATCTATATTGGAAGGCGTCT
GACAACCTCCACCAGCACCTTTTGA

Library Parental gene expression (RPM)
bodymap2_liver 85 .68 RPM
bodymap2_lung 21 .48 RPM
bodymap2_breast 50 .86 RPM
bodymap2_adipose 44 .33 RPM
bodymap2_adrenal 10 .87 RPM
bodymap2_skeletal_muscle 162 .78 RPM
bodymap2_thyroid 42 .54 RPM
bodymap2_prostate 40 .91 RPM
bodymap2_colon 54 .80 RPM
bodymap2_testis 41 .48 RPM
bodymap2_brain 89 .99 RPM
bodymap2_heart 96 .75 RPM
bodymap2_white_blood_cells 10 .81 RPM
bodymap2_lymph_node 28 .96 RPM
bodymap2_ovary 28 .72 RPM
bodymap2_kidney 59 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002150 ortholog_one2one 2 retrogenes
retro_chof_1555, retro_chof_559,
Callithrix jacchus ENSCJAG00000000228 ortholog_one2one 8 retrogenes
retro_cjac_1882, retro_cjac_2068, retro_cjac_2105, retro_cjac_2106, retro_cjac_2107, retro_cjac_2108, retro_cjac_3953, retro_cjac_4031,
Cavia porcellus ENSCPOG00000005882 ortholog_one2one 7 retrogenes
retro_cpor_1138, retro_cpor_1283, retro_cpor_344, retro_cpor_376, retro_cpor_496, retro_cpor_600, retro_cpor_647,
Dipodomys ordii ENSDORG00000012511 ortholog_one2one 1 retrogene
retro_dord_431,
Equus caballus ENSECAG00000017458 ortholog_one2one 3 retrogenes
retro_ecab_652, retro_ecab_921, retro_ecab_969,
Echinops telfairi ENSETEG00000011704 ortholog_one2one 1 retrogene
retro_etel_1779,
Gorilla gorilla ENSGGOG00000014520 ortholog_one2one 17 retrogenes
retro_ggor_1138, retro_ggor_1433, retro_ggor_1434, retro_ggor_1436, retro_ggor_1437, retro_ggor_1438, retro_ggor_1439, retro_ggor_1440, retro_ggor_1466, retro_ggor_1467, retro_ggor_1468, retro_ggor_1469, retro_ggor_1472, retro_ggor_1474, retro_ggor_1475, retro_ggor_2521, retro_ggor_2599,
Microcebus murinus ENSMICG00000011985 ortholog_one2one 1 retrogene
retro_mmur_563,
Macaca mulatta ENSMMUG00000022445 ortholog_one2one 13 retrogenes
retro_mmul_1367, retro_mmul_1369, retro_mmul_1371, retro_mmul_1392, retro_mmul_1393, retro_mmul_1394, retro_mmul_1681, retro_mmul_355, retro_mmul_421, retro_mmul_739, retro_mmul_754, retro_mmul_772, retro_mmul_819,
Mus musculus ENSMUSG00000078566 ortholog_one2one 4 retrogenes
retro_mmus_1194, retro_mmus_1195, retro_mmus_2207, retro_mmus_3577,
Nomascus leucogenys ENSNLEG00000001613 ortholog_one2one 26 retrogenes
retro_nleu_140, retro_nleu_1708, retro_nleu_2220, retro_nleu_2306, retro_nleu_2617, retro_nleu_2619, retro_nleu_2620, retro_nleu_2621, retro_nleu_2870, retro_nleu_2872, retro_nleu_2903, retro_nleu_2904, retro_nleu_2905, retro_nleu_2907, retro_nleu_2910, retro_nleu_2917, retro_nleu_2918, retro_nleu_2919, retro_nleu_2920, retro_nleu_2921, retro_nleu_2923, retro_nleu_2924, retro_nleu_2942, retro_nleu_3064, retro_nleu_3103, retro_nleu_3104,
Pongo abelii ENSPPYG00000002771 ortholog_one2one 18 retrogenes
retro_pabe_1629, retro_pabe_1631, retro_pabe_1632, retro_pabe_1633, retro_pabe_1665, retro_pabe_1666, retro_pabe_1667, retro_pabe_1670, retro_pabe_1688, retro_pabe_1694, retro_pabe_1703, retro_pabe_2499, retro_pabe_3049, retro_pabe_3050, retro_pabe_3120, retro_pabe_3122, retro_pabe_3533, retro_pabe_3569,
Pan troglodytes ENSPTRG00000003067 ortholog_one2one 17 retrogenes
retro_ptro_1005, retro_ptro_1317, retro_ptro_1319, retro_ptro_1323, retro_ptro_1324, retro_ptro_1325, retro_ptro_1327, retro_ptro_1353, retro_ptro_1354, retro_ptro_1356, retro_ptro_1357, retro_ptro_1359, retro_ptro_1360, retro_ptro_1361, retro_ptro_1363, retro_ptro_2629, retro_ptro_3062,
Rattus norvegicus ENSRNOG00000017243 ortholog_one2one 3 retrogenes
retro_rnor_1070, retro_rnor_2645, retro_rnor_2732,
Sus scrofa ENSSSCG00000024388 ortholog_one2one 1 retrogene
retro_sscr_827,
Ictidomys tridecemlineatus ENSSTOG00000012456 ortholog_one2one 1 retrogene
retro_itri_299,
Tupaia belangeri ENSTBEG00000000487 ortholog_one2one 1 retrogene
retro_tbel_2600,
Tursiops truncatus ENSTTRG00000008038 ortholog_one2one 1 retrogene
retro_ttru_1538,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1308 97.95 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_hsap_1486 64.81 54.64
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_hsap_1976 64.89 66.49
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_hsap_1979 59.17 60.82
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_hsap_1980 58.12 96.91
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_hsap_1983 56.21 91.11
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_hsap_1985 62.14 56.67
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_hsap_1986 65.69 56.67
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_hsap_1988 64.43 98.97
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_hsap_1990 63.83 95.88
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_hsap_2035 54.76 63.92
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_hsap_2036 55.66 53.61
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_hsap_2039 58.97 98.97
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_hsap_2040 67.86 98.97
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_hsap_2042 65.42 58.89
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_hsap_2043 69.00 51.03
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_hsap_2044 60.76 85.56
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_hsap_2046 58.20 61.86
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_hsap_3741 59.88 84.02
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_hsap_3743 57.81 65.46
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_hsap_3858 63.35 79.38
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000176171 retrocopies