Parental gene:

PPA1, ENSG00000180817

Aliases:PPA1, HEL-S-66p, IOPPP, PP, PP1, SID6-8061
Description:pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:9226]
Organism:Human (Homo sapiens)
Coordinates:10:71962586..71993667(-)


>ENSG00000180817
ATGAGCGGCTTCAGCACCGAGGAGCGCGCCGCGCCCTTCTCCCTGGAGTACCGAGTCTTCCTCAAAAATGAGAAAGGACA
ATATATATCTCCATTTCATGATATTCCAATTTATGCAGATAAGGATGTGTTTCACATGGTAGTTGAAGTACCACGCTGGT
CTAATGCAAAAATGGAGATTGCTACAAAGGACCCTTTAAACCCTATTAAACAAGATGTGAAAAAAGGAAAACTTCGCTAT
GTTGCGAATTTGTTCCCGTATAAAGGATATATCTGGAACTATGGTGCCATCCCTCAGACTTGGGAAGACCCAGGGCACAA
TGATAAACATACTGGCTGTTGTGGTGACAATGACCCAATTGATGTGTGTGAAATTGGAAGCAAGGTATGTGCAAGAGGTG
AAATAATTGGCGTGAAAGTTCTAGGCATATTGGCTATGATTGACGAAGGGGAAACCGACTGGAAAGTCATTGCCATTAAT
GTGGATGATCCTGATGCAGCCAATTATAATGATATCAATGATGTCAAACGGCTGAAACCTGGCTACTTAGAAGCTACTGT
GGACTGGTTTAGAAGGTATAAGGTTCCTGATGGAAAACCAGAAAATGAGTTTGCGTTTAATGCAGAATTTAAAGATAAGG
ACTTTGCCATTGATATTATTAAAAGCACTCATGACCATTGGAAAGCATTAGTGACTAAGAAAACGAATGGAAAAGGAATC
AGTTGCATGAATACAACTTTGTCTGAGAGCCCCTTCAAGTGTGATCCTGATGCTGCCAGAGCCATTGTGGATGCTTTACC
ACCACCCTGTGAATCTGCCTGCACAGTACCAACAGACGTGGATAAGTGGTTCCATCACCAGAAAAACTAA

Library Parental gene expression (RPM)
bodymap2_liver 77 .65 RPM
bodymap2_lung 182 .82 RPM
bodymap2_breast 244 .77 RPM
bodymap2_adipose 73 .93 RPM
bodymap2_adrenal 107 .20 RPM
bodymap2_skeletal_muscle 71 .50 RPM
bodymap2_thyroid 224 .34 RPM
bodymap2_prostate 90 .06 RPM
bodymap2_colon 123 .44 RPM
bodymap2_testis 133 .29 RPM
bodymap2_brain 125 .97 RPM
bodymap2_heart 54 .00 RPM
bodymap2_white_blood_cells 73 .42 RPM
bodymap2_lymph_node 111 .82 RPM
bodymap2_ovary 74 .68 RPM
bodymap2_kidney 137 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000014023 ortholog_one2one 1 retrogene
retro_cpor_615,
Loxodonta africana ENSLAFG00000004048 ortholog_one2one 1 retrogene
retro_lafr_990,
Myotis lucifugus ENSMLUG00000017790 ortholog_one2one 1 retrogene
retro_mluc_2469,
Macaca mulatta ENSMMUG00000006397 ortholog_one2one 1 retrogene
retro_mmul_1540,
Nomascus leucogenys ENSNLEG00000016098 possible_ortholog 1 retrogene
retro_nleu_7,
Oryctolagus cuniculus ENSOCUG00000016001 ortholog_one2one 2 retrogenes
retro_ocun_1373, retro_ocun_883,
Procavia capensis ENSPCAG00000006788 ortholog_one2one 1 retrogene
retro_pcap_247,
Pan troglodytes ENSPTRG00000002585 ortholog_one2one 2 retrogenes
retro_ptro_1864, retro_ptro_2210,
Tupaia belangeri ENSTBEG00000008947 ortholog_one2one 3 retrogenes
retro_tbel_3560, retro_tbel_3561, retro_tbel_848,
Tarsius syrichta ENSTSYG00000005511 ortholog_one2one 1 retrogene
retro_tsyr_1856,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2756 89.31 100.00
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2. retro_hsap_3267 92.76 100.00
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Download FASTA sequences of all ENSG00000180817 retrocopies