Parental gene:

PPA1, ENSLAFG00000004048

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_10:51802441..51833393(-)


>ENSLAFG00000004048
GTCTCCGGTACCATGGACGCCTTCAGCAGAGAGGAGCGCGCCCCGCCCTTCACCCTCGAGTACCGGGTCTTCTTCAAAAA
CGAAAAAGGACAGTACATATCTCCATTTCATGATATTCCAATTTATGCCAAGAAGGATGTGTTCCACATGGTAGTTGAAG
TACCACGATGGTCTAATGCAAAAATGGAGATTGCTACAAAGGACCCTTTAAACCCAATTAAACAAGATGTGAAAAAAGGA
AAACTCCGCTATGTTGCAAATTTGTTCCCTTATAAAGGATACATCTGGAACTATGGTGCCATCCCTCAGACTTGGGAGGA
CCCGGGACACAATGACGGACACACTGGCTGTTGTGGCGACAATGACCCAATTGATGTGTGTGAAATTGGAAGCAAGGTAT
GTGCAAGAGGTGAGATAATCAGTGTGAAAGTTTTGGGCATACTGGCTATGATTGACGAAGGGGAAACTGACTGGAAAGTC
ATTGCCATTAATGTGGATGACCCTGATGCAGCCAATTATAATGATATTAATGATGTCAAACGGCTGAAGCCTGGGTACCT
AGAAGCTACTGTGGACTGGTTTAGAAGGTACAAGGTTCCTGATGGAAAACCAGAGAACCAGTTCGCTTTCAATGCAGAAT
TTAAAGATAAGGATTTTGCAATTGATATTATTAAAAGCACCCATGACCATTGGAAAGCACTGATAACTAAGAAAACCGAT
GGAAAAGGAATCAGTTGCATGAATACAACGGTGTCTGAGAGCCCCTTCAAGTGTGACCCCGATGCTGCCAAAGCCATTGT
GGATGCTTTACCACCACCTTGTGAATCTGCCTGCACAATACCAACAGACGTGGATAAATGGTTTCATCACCAGAAAAACT
AG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014033 ortholog_one2one 1 retrogene
retro_cfam_1040,
Cavia porcellus ENSCPOG00000014023 ortholog_one2one 1 retrogene
retro_cpor_615,
Dasypus novemcinctus ENSDNOG00000014861 ortholog_one2one 1 retrogene
retro_dnov_1310,
Equus caballus ENSECAG00000018686 ortholog_one2one 1 retrogene
retro_ecab_691,
Homo sapiens ENSG00000180817 ortholog_one2one 2 retrogenes
retro_hsap_2756, retro_hsap_3267,
Myotis lucifugus ENSMLUG00000017790 ortholog_one2one 1 retrogene
retro_mluc_2469,
Macaca mulatta ENSMMUG00000006397 ortholog_one2one 1 retrogene
retro_mmul_1540,
Nomascus leucogenys ENSNLEG00000016098 ortholog_one2many 1 retrogene
retro_nleu_7,
Oryctolagus cuniculus ENSOCUG00000016001 ortholog_one2one 2 retrogenes
retro_ocun_1373, retro_ocun_883,
Procavia capensis ENSPCAG00000006788 ortholog_one2one 1 retrogene
retro_pcap_247,
Pongo abelii ENSPPYG00000029405 ortholog_one2many 1 retrogene
retro_pabe_37,
Pan troglodytes ENSPTRG00000002585 ortholog_one2one 2 retrogenes
retro_ptro_1864, retro_ptro_2210,
Tupaia belangeri ENSTBEG00000008947 ortholog_one2one 3 retrogenes
retro_tbel_3560, retro_tbel_3561, retro_tbel_848,
Tarsius syrichta ENSTSYG00000005511 ortholog_one2one 1 retrogene
retro_tsyr_1856,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_990 74.29 59.39
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Download FASTA sequences of all ENSLAFG00000004048 retrocopies