Parental gene: | PPA1, ENSPTRG00000002585 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:68705126..68736056(-) |
>ENSPTRG00000002585
ATGAACGGCTTCAGCACCGAGGAGCGCGCCGCGCCCTTCTCCCTGGAGTACCGAGTCTTCCTCAAAAATGAGAAAGGACA
ATATATATCTCCATTTCATGATATTCCAATTTATGCAGATAAGGATGTGTTTCACATGGTAGTTGAAGTACCACGCTGGT
CTAATGCAAAAATGGAGATTGCTACAAAGGACCCTTTAAACCCTATTAAACAAGATGTGAAAAAAGGAAAACTTCGCTAT
GTTGCGAATTTGTTCCCGTATAAAGGATATATCTGGAACTATGGTGCCATCCCTCAGACTTGGGAAGACCCAGGGCACAA
TGATAAACATACTGGCTGTTGTGGTGACAATGACCCAATTGATGTGTGTGAAATTGGAAGCAAGGTATGTGCAAGAGGTG
AAATAATTGGCGTGAAAGTTCTAGGCATATTGGCTATGATTGATGAAGGGGAAACCGACTGGAAAGTCATTGCCATTAAT
GTGGATGATCCTGATGCAGCCAATTATAATGATATCAATGATGTCAAACGGCTGAAACCTGGCTACTTAGAAGCTACTGT
GGACTGGTTTAGAAGGTATAAGGTTCCTGATGGAAAACCAGAAAATGAGTTTGCGTTTAATGCAGAATTTAAAGATAAGG
ACTTTGCCATTGATATTATTAAAAGCACTCATGACCATTGGAAAGCATTAGTGACTAAGAAAACGAATGGAAAAGGAATC
AGTTGCATGAATACAACTGTGTCTGAGAGCCCCTTCAAGTGTGATCCTGATGCTGCCAGAGCCATTGTGGATGCTTTACC
ACCACCCTGTGAATCTGCCTGCACAGTACCAACAGACGTGGATAAGTGGTTCCATCACCAGAAAAACTAA
ATGAACGGCTTCAGCACCGAGGAGCGCGCCGCGCCCTTCTCCCTGGAGTACCGAGTCTTCCTCAAAAATGAGAAAGGACA
ATATATATCTCCATTTCATGATATTCCAATTTATGCAGATAAGGATGTGTTTCACATGGTAGTTGAAGTACCACGCTGGT
CTAATGCAAAAATGGAGATTGCTACAAAGGACCCTTTAAACCCTATTAAACAAGATGTGAAAAAAGGAAAACTTCGCTAT
GTTGCGAATTTGTTCCCGTATAAAGGATATATCTGGAACTATGGTGCCATCCCTCAGACTTGGGAAGACCCAGGGCACAA
TGATAAACATACTGGCTGTTGTGGTGACAATGACCCAATTGATGTGTGTGAAATTGGAAGCAAGGTATGTGCAAGAGGTG
AAATAATTGGCGTGAAAGTTCTAGGCATATTGGCTATGATTGATGAAGGGGAAACCGACTGGAAAGTCATTGCCATTAAT
GTGGATGATCCTGATGCAGCCAATTATAATGATATCAATGATGTCAAACGGCTGAAACCTGGCTACTTAGAAGCTACTGT
GGACTGGTTTAGAAGGTATAAGGTTCCTGATGGAAAACCAGAAAATGAGTTTGCGTTTAATGCAGAATTTAAAGATAAGG
ACTTTGCCATTGATATTATTAAAAGCACTCATGACCATTGGAAAGCATTAGTGACTAAGAAAACGAATGGAAAAGGAATC
AGTTGCATGAATACAACTGTGTCTGAGAGCCCCTTCAAGTGTGATCCTGATGCTGCCAGAGCCATTGTGGATGCTTTACC
ACCACCCTGTGAATCTGCCTGCACAGTACCAACAGACGTGGATAAGTGGTTCCATCACCAGAAAAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 99 .35 RPM |
| SRP007412_cerebellum | 81 .09 RPM |
| SRP007412_heart | 48 .41 RPM |
| SRP007412_kidney | 69 .01 RPM |
| SRP007412_liver | 95 .45 RPM |
| SRP007412_testis | 65 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000014023 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000180817 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000004048 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017790 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006397 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016098 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000016001 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000006788 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008947 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005511 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1864 | 89.31 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2210 | 94.74 | 85.47 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000002585 retrocopies