Parental gene: | C1D, ENSG00000197223 |
| Aliases: | None |
| Description: | C1D nuclear receptor corepressor [Source:HGNC Symbol;Acc:29911] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:68268261..68338080(-) |
>ENSG00000197223
ATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTCACGAGTATTTGTCAGCGTTTGAGAATTCCATTGGTGC
TGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGAAATGAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAA
AAGTGGATTTGGTTTCTGCATACACATTAAATTCAATGTTTTGGGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAA
CATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGAACAGAGTCAAGGAAATAACAGACAAGAAAAAGGCTGG
CAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAATGCCCTCTGGGAACCAAAATCGAAAAATGCATCAAAAGTTG
CCAATAAAGGAAAAAGTAAAAGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 9 .34 RPM |
| bodymap2_adrenal | 18 .61 RPM |
| bodymap2_brain | 17 .32 RPM |
| bodymap2_breast | 17 .59 RPM |
| bodymap2_colon | 13 .26 RPM |
| bodymap2_heart | 12 .68 RPM |
| bodymap2_kidney | 21 .88 RPM |
| bodymap2_liver | 11 .64 RPM |
| bodymap2_lung | 17 .04 RPM |
| bodymap2_lymph_node | 15 .46 RPM |
| bodymap2_ovary | 16 .15 RPM |
| bodymap2_prostate | 17 .48 RPM |
| bodymap2_skeletal_muscle | 9 .88 RPM |
| bodymap2_testis | 19 .42 RPM |
| bodymap2_thyroid | 18 .76 RPM |
| bodymap2_white_blood_cells | 20 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004859 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000004567 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000030099 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000006719 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006589 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000006739 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000014857 | ortholog_one2one | 5 retrogenes | |
| Felis catus | ENSFCAG00000028933 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000025982 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000002083 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010791 | ortholog_one2many | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000017209 | ortholog_one2many | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000003561 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009973 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009771 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009586 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000012354 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000023558 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005982 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000003913 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000008352 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000008354 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009797 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013982 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_659 | 94.74 | 84.44 | Please wait, loading  |
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| 2. | retro_hsap_699 | 87.50 | 84.44 | Please wait, loading |
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| 3. | retro_hsap_700 | 89.47 | 84.44 | Please wait, loading |
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| 4. | retro_hsap_701 | 88.16 | 84.44 | Please wait, loading |
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| 5. | retro_hsap_904 | 73.20 | 53.89 | Please wait, loading |
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Download FASTA sequences of all ENSG00000197223 retrocopies