RetrogeneDB ID: | retro_chof_710 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_138580:492..925(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C1D | ||
Ensembl ID: | ENSCHOG00000006719 | ||
Aliases: | None | ||
Description: | C1D nuclear receptor corepressor [Source:HGNC Symbol;Acc:29911] |
Percent Identity: | 91.72 % |
Parental protein coverage: | 80.45 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LVIMAGEEINEDYPVEIHEYLSTFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMF |
LVIMAGEEINEDYPVEIHEYLSTFENS.GAVDEMLKTMMS.SRNELLQKLDPLE.AKVDLVSAYTLNSMF | |
Retrocopy | LVIMAGEEINEDYPVEIHEYLSTFENSTGAVDEMLKTMMSISRNELLQKLDPLE*AKVDLVSAYTLNSMF |
Parental | WVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWEPK-PKNASKVASK |
WVYLATQGVNPKE.PV.QELERIRVYMNRVKEIT.KKKAGKLDRGAAS.FVKNALWEPK.PKNASKV.SK | |
Retrocopy | WVYLATQGVNPKENPVNQELERIRVYMNRVKEITHKKKAGKLDRGAASTFVKNALWEPK>PKNASKVTSK |
Parental | GKSKN |
G...N | |
Retrocopy | GEK*N |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |