Parental gene: | C1D, ENSGGOG00000025982 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 2a:69306489..69327880(-) |
>ENSGGOG00000025982
ATGCCCTCTCCGTCTGTCTCTACCTCTGCAGCCAGTGTTTTAGAAGGAGTATGTGGAAGGGCAAGGAGTACCTATAGAAC
CCGGGAGGAGGGTGAGGAGCAGAGCTGGTCAGCCATAATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTC
ACGAGTATTTGTCAGCGTTTGAGAATTCCATTGGTGCTGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGAAAT
GAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAAAAGTGGATTTGGTTTCTGCATACACATTAAATTCAATGTTTTG
GGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAACATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGA
ACAGAGTCAAGGAAATAACAGACAAGAAAAAGGCTGGCAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAATGCC
CTCTGGGAACCAAAACCGAAAAATGCATCAAAAGTTGCCAATAAAGGAAAAAGTAAAAATTAA
ATGCCCTCTCCGTCTGTCTCTACCTCTGCAGCCAGTGTTTTAGAAGGAGTATGTGGAAGGGCAAGGAGTACCTATAGAAC
CCGGGAGGAGGGTGAGGAGCAGAGCTGGTCAGCCATAATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTC
ACGAGTATTTGTCAGCGTTTGAGAATTCCATTGGTGCTGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGAAAT
GAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAAAAGTGGATTTGGTTTCTGCATACACATTAAATTCAATGTTTTG
GGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAACATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGA
ACAGAGTCAAGGAAATAACAGACAAGAAAAAGGCTGGCAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAATGCC
CTCTGGGAACCAAAACCGAAAAATGCATCAAAAGTTGCCAATAAAGGAAAAAGTAAAAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .32 RPM |
| SRP007412_cerebellum | 3 .47 RPM |
| SRP007412_heart | 1 .38 RPM |
| SRP007412_kidney | 13 .37 RPM |
| SRP007412_liver | 6 .96 RPM |
| SRP007412_testis | 9 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004859 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000004567 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000030099 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000006719 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006589 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000006739 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000014857 | ortholog_one2one | 5 retrogenes | |
| Felis catus | ENSFCAG00000028933 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000197223 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000002083 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010791 | ortholog_one2many | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000017209 | ortholog_one2many | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000003561 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009973 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009771 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009586 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000012354 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000023558 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005982 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000003913 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000008352 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000008354 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009797 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013982 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_573 | 90.28 | 80.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_596 | 88.16 | 84.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_731 | 72.16 | 53.89 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000025982 retrocopies