Parental gene: | SUCLA2, ENSGGOG00000008224 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 13:30109588..30169421(-) |
>ENSGGOG00000008224
GCCGAGGGGACGGGGTCCGACTCAGAAATGGCGGCCTCCATGTTCTACGGCAGGCTGGTGGCCGTGGCCATTCTTCGGAG
CCACCGGCCTCGGACGGCCCAGCGGGCCGCTGCTCAGGTTCTGGGAAGTTCTGGATTGTTTAATAACCATGGACTCCAAG
TACAGCAGCAACAGCAAAGGAATCTCTCACTACATGAATACATGAGTATGGAATTATTGCAAGAAGCTGGTGTCTCCGTT
CCCAAAGGATATGTGGCAAAGTCACCAGATGAAGCTTATGCAATTGCCAAAAAATTAGGTTCAAAAGATGTTGTGATAAA
GGCACAGGTTTTAGCTGGTGGTAGAGGAAAAGGAACATTTGAAAGTGGCCTCAAAGGAGGAGTGAAGATAGTTTTCTCTC
CAGAAGAAGCAAAAGCTGTTTCTTCACAAATGATTGGGAAAAAATTGTTTACCAAGCAAACGGGAGAAAAGGGCAGAATA
TGCAATCAAGTATTGGTCTGTGAGCGAAAATATCCCAGGAGAGAATACTACTTTGCAATAACAATGGAAAGGTCATTTCA
AGGTCCTGTATTAATAGGAAGTTCACATGGTGGTGTCAACATTGAAGATGTTGCTGCTGAGACTCCTGAAGCAATAATTA
AAGAACCTATTGATATTGAAGAAGGCATCAAAAAGGAACAAGCTCTCCAGCTTGCACAGAAGATGGGATTTCCACCTAAT
ATTGTGGAATCAGCAGCAGAAAACATGGTCAAGCTTTACAGCCTTTTTCTGAAATACGATGCAACCATGATAGAAATAAA
TCCAATGGTGGAAGATTCAGATGGAGCTGTATTGTGTATGGATGCAAAGATCAATTTTGACTCTAATTCAGCCTATCGCC
AAAAGAAAATCTTTGATCTACAGGACTGGACCCAGGAAGATGAAAGGGACAAAGATGCTGCTAAGGCAAATCTCAACTAC
ATTGGCCTCGATGGAAATATAGGCTGCCTAGTAAATGGTGCTGGTTTGGCTATGGCCACAATGGATATAATAAAACTTCA
TGGAGGGACTCCAGCCAACTTCCTTGATGTTGGTGGTGGTGCTACAGTCCATCAAGTAACAGAAGCATTTAAGCTTATCA
CTTCAGATAAAAAGGTACTGGCTATTCTGGTCAACATTTTTGGAGGAATCATGCGCTGTGATGTTATTGCACAGGGTATA
GTCATGGCAGTAAAAGACTTGGAAATTAAAATACCTGTTGTGGTACGGTTACAAGGTACACGAGTCGATGATGCTAAGGC
ACTGATAGCGGACAGTGGACTTAAAATACTTGCTTGTGATGACTTGGATGAAGCTGCTAGAATGGTTGTAAAGCTCTCTG
AAATAGTGACCTTAGCGAAGCAAGCACATGTGGATGTGAAATTTCAGTTGCCAATATGA
GCCGAGGGGACGGGGTCCGACTCAGAAATGGCGGCCTCCATGTTCTACGGCAGGCTGGTGGCCGTGGCCATTCTTCGGAG
CCACCGGCCTCGGACGGCCCAGCGGGCCGCTGCTCAGGTTCTGGGAAGTTCTGGATTGTTTAATAACCATGGACTCCAAG
TACAGCAGCAACAGCAAAGGAATCTCTCACTACATGAATACATGAGTATGGAATTATTGCAAGAAGCTGGTGTCTCCGTT
CCCAAAGGATATGTGGCAAAGTCACCAGATGAAGCTTATGCAATTGCCAAAAAATTAGGTTCAAAAGATGTTGTGATAAA
GGCACAGGTTTTAGCTGGTGGTAGAGGAAAAGGAACATTTGAAAGTGGCCTCAAAGGAGGAGTGAAGATAGTTTTCTCTC
CAGAAGAAGCAAAAGCTGTTTCTTCACAAATGATTGGGAAAAAATTGTTTACCAAGCAAACGGGAGAAAAGGGCAGAATA
TGCAATCAAGTATTGGTCTGTGAGCGAAAATATCCCAGGAGAGAATACTACTTTGCAATAACAATGGAAAGGTCATTTCA
AGGTCCTGTATTAATAGGAAGTTCACATGGTGGTGTCAACATTGAAGATGTTGCTGCTGAGACTCCTGAAGCAATAATTA
AAGAACCTATTGATATTGAAGAAGGCATCAAAAAGGAACAAGCTCTCCAGCTTGCACAGAAGATGGGATTTCCACCTAAT
ATTGTGGAATCAGCAGCAGAAAACATGGTCAAGCTTTACAGCCTTTTTCTGAAATACGATGCAACCATGATAGAAATAAA
TCCAATGGTGGAAGATTCAGATGGAGCTGTATTGTGTATGGATGCAAAGATCAATTTTGACTCTAATTCAGCCTATCGCC
AAAAGAAAATCTTTGATCTACAGGACTGGACCCAGGAAGATGAAAGGGACAAAGATGCTGCTAAGGCAAATCTCAACTAC
ATTGGCCTCGATGGAAATATAGGCTGCCTAGTAAATGGTGCTGGTTTGGCTATGGCCACAATGGATATAATAAAACTTCA
TGGAGGGACTCCAGCCAACTTCCTTGATGTTGGTGGTGGTGCTACAGTCCATCAAGTAACAGAAGCATTTAAGCTTATCA
CTTCAGATAAAAAGGTACTGGCTATTCTGGTCAACATTTTTGGAGGAATCATGCGCTGTGATGTTATTGCACAGGGTATA
GTCATGGCAGTAAAAGACTTGGAAATTAAAATACCTGTTGTGGTACGGTTACAAGGTACACGAGTCGATGATGCTAAGGC
ACTGATAGCGGACAGTGGACTTAAAATACTTGCTTGTGATGACTTGGATGAAGCTGCTAGAATGGTTGTAAAGCTCTCTG
AAATAGTGACCTTAGCGAAGCAAGCACATGTGGATGTGAAATTTCAGTTGCCAATATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 66 .85 RPM |
| SRP007412_cerebellum | 36 .21 RPM |
| SRP007412_heart | 17 .48 RPM |
| SRP007412_kidney | 45 .22 RPM |
| SRP007412_liver | 11 .47 RPM |
| SRP007412_testis | 37 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014610 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009278 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000014961 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000136143 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027438 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007539 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001488 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002948 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007452 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005352 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000005859 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1668 | 85.60 | 52.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1694 | 70.71 | 79.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2327 | 86.31 | 91.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000008224 retrocopies