Parental gene:

MTCH2, ENSGGOG00000008281

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:11:48390568..48419199(-)


>ENSGGOG00000008281
ATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGTTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGCT
CATCCAGGTGGGATACGAGCCTCTTCCTCCAACAATAGGACGAAATATTTTTGGGCGGCAAGTGTGTCAGCTTCCTGGTC
TCTTTAGTTATGCTCAGCACATTGCCAGTATCGATGGGAGGCGCGGGTTGTTCACAGGCTTAACTCCAAGACTGTGTTCG
GGAGTCCTTGGAACTGTGGTCCATGGTAAAGTTTTACAGCATTACCAGGAGAGTGACAAGGGTGAGGAGTTAGGACCTGG
AAATGTACAGAAAGAAGTCTCATCTTCCTTTGACCACGTTATCAAGGAGACAACTCGAGAGATGATCGCTCGTTCTGCTG
CTACCCTCATCACACATCCCTTCCATGTGATCACTCTGAGATCTATGGTACAGTTCATTGGCAGAGAATCTAAGTACTGT
GGACTTTGTGATTCCATAATAACCATCTATCGGGAAGAGGGCATTCTAGGATTTTTCGCGGGTCTTGTTCCTCGCCTTCT
AGGTGACATCCTTTCTTTGTGGCTGTGTAACTCACTGGCCTACCTCGTCAATACCTATGCACTGGACAGTGGGGTTTCCA
CCATGAATGAAATGAAGAGTTATTCTCAAGCTGTCACAGGATTTTTTGCGAGTATGTTGACCTATCCCTTTGTGCTTGTC
TCCAATCTTATGGCTGTCAACAACTGTGGTCTTGCTGGTGGATGCCCTCCTTACTCCCCAATATATACGTCTTGGATAGA
TTGTTGGTGCATGCTACAAAAAGAGGGGAATATGAGCCGAGGAAATAGCTTATTTTTCCGGAAGGTCCCCTTTGGGAAGA
CTTATTGTTGTGACCTGAAAATGTTAATTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 42 .68 RPM
SRP007412_cerebellum 48 .93 RPM
SRP007412_heart 18 .54 RPM
SRP007412_kidney 116 .57 RPM
SRP007412_liver 60 .27 RPM
SRP007412_testis 199 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018742 ortholog_one2one 1 retrogene
retro_btau_1321,
Choloepus hoffmanni ENSCHOG00000008473 ortholog_one2one 1 retrogene
retro_chof_2162,
Callithrix jacchus ENSCJAG00000020213 ortholog_one2one 3 retrogenes
retro_cjac_1551, retro_cjac_2003, retro_cjac_3812,
Dasypus novemcinctus ENSDNOG00000001221 ortholog_one2one 1 retrogene
retro_dnov_1867,
Homo sapiens ENSG00000109919 ortholog_one2one 2 retrogenes
retro_hsap_1041, retro_hsap_1690,
Gorilla gorilla ENSGGOG00000003908 within_species_paralog 1 retrogene
retro_ggor_2481,
Mustela putorius furo ENSMPUG00000003852 ortholog_one2one 1 retrogene
retro_mputfur_312,
Mus musculus ENSMUSG00000027282 ortholog_one2one 1 retrogene
retro_mmus_2657,
Nomascus leucogenys ENSNLEG00000014704 ortholog_one2one 2 retrogenes
retro_nleu_1335, retro_nleu_913,
Oryctolagus cuniculus ENSOCUG00000006368 ortholog_one2one 2 retrogenes
retro_ocun_1197, retro_ocun_983,
Otolemur garnettii ENSOGAG00000011607 ortholog_one2one 1 retrogene
retro_ogar_2578,
Pongo abelii ENSPPYG00000003296 ortholog_one2one 3 retrogenes
retro_pabe_1392, retro_pabe_1894, retro_pabe_872,
Pan troglodytes ENSPTRG00000003573 ortholog_one2one 2 retrogenes
retro_ptro_1144, retro_ptro_710,
Pteropus vampyrus ENSPVAG00000007348 ortholog_one2one 1 retrogene
retro_pvam_954,
Sorex araneus ENSSARG00000001399 ortholog_one2one 1 retrogene
retro_sara_705,
Sus scrofa ENSSSCG00000013232 ortholog_one2one 3 retrogenes
retro_sscr_262, retro_sscr_279, retro_sscr_602,
Tursiops truncatus ENSTTRG00000014169 ortholog_one2one 2 retrogenes
retro_ttru_1476, retro_ttru_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_822 74.73 60.07
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2. retro_ggor_1267 69.30 74.92
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3. retro_ggor_3083 72.00 73.60
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Download FASTA sequences of all ENSGGOG00000008281 retrocopies