Parental gene: | MTCH2, ENSGGOG00000008281 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 11:48390568..48419199(-) |
>ENSGGOG00000008281
ATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGTTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGCT
CATCCAGGTGGGATACGAGCCTCTTCCTCCAACAATAGGACGAAATATTTTTGGGCGGCAAGTGTGTCAGCTTCCTGGTC
TCTTTAGTTATGCTCAGCACATTGCCAGTATCGATGGGAGGCGCGGGTTGTTCACAGGCTTAACTCCAAGACTGTGTTCG
GGAGTCCTTGGAACTGTGGTCCATGGTAAAGTTTTACAGCATTACCAGGAGAGTGACAAGGGTGAGGAGTTAGGACCTGG
AAATGTACAGAAAGAAGTCTCATCTTCCTTTGACCACGTTATCAAGGAGACAACTCGAGAGATGATCGCTCGTTCTGCTG
CTACCCTCATCACACATCCCTTCCATGTGATCACTCTGAGATCTATGGTACAGTTCATTGGCAGAGAATCTAAGTACTGT
GGACTTTGTGATTCCATAATAACCATCTATCGGGAAGAGGGCATTCTAGGATTTTTCGCGGGTCTTGTTCCTCGCCTTCT
AGGTGACATCCTTTCTTTGTGGCTGTGTAACTCACTGGCCTACCTCGTCAATACCTATGCACTGGACAGTGGGGTTTCCA
CCATGAATGAAATGAAGAGTTATTCTCAAGCTGTCACAGGATTTTTTGCGAGTATGTTGACCTATCCCTTTGTGCTTGTC
TCCAATCTTATGGCTGTCAACAACTGTGGTCTTGCTGGTGGATGCCCTCCTTACTCCCCAATATATACGTCTTGGATAGA
TTGTTGGTGCATGCTACAAAAAGAGGGGAATATGAGCCGAGGAAATAGCTTATTTTTCCGGAAGGTCCCCTTTGGGAAGA
CTTATTGTTGTGACCTGAAAATGTTAATTTGA
ATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGTTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGCT
CATCCAGGTGGGATACGAGCCTCTTCCTCCAACAATAGGACGAAATATTTTTGGGCGGCAAGTGTGTCAGCTTCCTGGTC
TCTTTAGTTATGCTCAGCACATTGCCAGTATCGATGGGAGGCGCGGGTTGTTCACAGGCTTAACTCCAAGACTGTGTTCG
GGAGTCCTTGGAACTGTGGTCCATGGTAAAGTTTTACAGCATTACCAGGAGAGTGACAAGGGTGAGGAGTTAGGACCTGG
AAATGTACAGAAAGAAGTCTCATCTTCCTTTGACCACGTTATCAAGGAGACAACTCGAGAGATGATCGCTCGTTCTGCTG
CTACCCTCATCACACATCCCTTCCATGTGATCACTCTGAGATCTATGGTACAGTTCATTGGCAGAGAATCTAAGTACTGT
GGACTTTGTGATTCCATAATAACCATCTATCGGGAAGAGGGCATTCTAGGATTTTTCGCGGGTCTTGTTCCTCGCCTTCT
AGGTGACATCCTTTCTTTGTGGCTGTGTAACTCACTGGCCTACCTCGTCAATACCTATGCACTGGACAGTGGGGTTTCCA
CCATGAATGAAATGAAGAGTTATTCTCAAGCTGTCACAGGATTTTTTGCGAGTATGTTGACCTATCCCTTTGTGCTTGTC
TCCAATCTTATGGCTGTCAACAACTGTGGTCTTGCTGGTGGATGCCCTCCTTACTCCCCAATATATACGTCTTGGATAGA
TTGTTGGTGCATGCTACAAAAAGAGGGGAATATGAGCCGAGGAAATAGCTTATTTTTCCGGAAGGTCCCCTTTGGGAAGA
CTTATTGTTGTGACCTGAAAATGTTAATTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 42 .68 RPM |
| SRP007412_cerebellum | 48 .93 RPM |
| SRP007412_heart | 18 .54 RPM |
| SRP007412_kidney | 116 .57 RPM |
| SRP007412_liver | 60 .27 RPM |
| SRP007412_testis | 199 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018742 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008473 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020213 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000001221 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000109919 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003908 | within_species_paralog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003852 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027282 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014704 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006368 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011607 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003296 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000003573 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000007348 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000001399 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000013232 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000014169 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_822 | 74.73 | 60.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1267 | 69.30 | 74.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_3083 | 72.00 | 73.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000008281 retrocopies